| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1972 |
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| Symbol | |
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| ID | 6123636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 2194976 |
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| End bp | 2197495 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641638544 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001765255 |
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| Protein GI | 170733308 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.125323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0456782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATTA TCAAACGACC GCCTTCTTCT TCCGACAGGA ACGAACCCCA CTACACGCTG
CGCCGTTCGC CGTCCGGAGC CTATTACCCC GATGACGACG ATCGCGACGA CGGCCGCCGC
GCGCAGCAGA GTGGCGGTGG CGGAGGGCGC CGCCGCACGT TCGGCTCGCG CGTCGCGCTG
TGGTTCGTCG GCCTGTTCGC GACGCTCGCG GTCGTCGGCG CGCTGATCGT CGGCTACGCG
CTGGTCGTGA TGGCGCCGCA ACTGCCGTCG CTCGATGCGC TGACCAACTA TCAGCCGAAG
GTGCCGCTGC GTGTGTTCAC CGCCGATCAC GTGCTGATCG GCGAGTTCGG CGAGGAGCGC
CGCAGCCTCG TGCGCTTCCA GGACATTCCC GACGTGATGA AGAAGGCCGT GCTCGCGATC
GAGGACTACC GCTTCTACGA GCACGGCGGC GTCGACTTCC TCGGCATCCT GCGCGCGGGC
GTGGCCGACC TGATGCATGG CGGCGCGCGC CAGGGCGCGA GCACGATCAC GATGCAGGTG
GCGCGCAACT TCTTCCTGTC GAGCGAGAAG ACCTACACGC GCAAGATCTA CGAAATGCTG
CTCGCGTACA AGATCGAGAA GGCCCTGACG AAGGACCAGA TCCTCGAGCT GTACATGAAC
CAGATCTATC TCGGCCAGCG TTCGTACGGC TTCGCGGCTG CGGCGCGCGT GTATTTCGGC
AAGGACCTGA AGGACATCAC GCTCGCGGAA GCCGCGATGC TCGCGGGGCT GCCGAAGGCG
CCGTCCGCGT ACAACCCGGT CGTCAATCCG AAGCGTGCGA AGGTGCGTCA GGAATACATC
CTGAAGCGCA TGCTCGACAT CGGCTACATC ACGCAGCCGC AGTACGACCA GGCGATCAAG
GAAGAGATCC ACGTGCGCAC GCCGGGCAAC CAGTACGCGG TTCACGGCGA GTACGTCGCC
GAGATGGTGC GGCAGATGAT GTACCAGCAG TACAAGGACG AAACCTACAC GCGCGGGCTG
ACCGTCACGA CGACGATCAA CTCGGCCGAC CAGGAAGCCG CGTATCAGGC CGTGCGTCGC
GGCATTCTCG ACTACGAGCG CCGTCACGGC TATCGCGGCC CGGAAGCATC GATCAACCTG
CCCGCGGCCG GCGACGAACG CGATGAGGCG ATCGACGATG CGCTCGCCGA TCACCCGGAC
AACGGCGATC TGCAATCGGC GGTCGTGCTG TCGGCATCGC CGAACGCGGT CGAGGTGCAG
TTCGTCGGCG GGGCGACCAC GACGATCGGC CCGGCCGGGC TGCGCTTCGT GTCGGCCGCG
CTGGGCGCCC GTGCGAACAA CGCGCTGCGC ATCAAGCCGG GCTCGGTCGT GCGCGTGCTG
AAGGACGGCA AGACGGGCTG GCAGGTGGTG CAGCTGCCGC AGGTCGAAGG CGCGCTCGTC
GCGATCGCGC CGCAGGACGG TGCGATCCGC TCGCTCGTCG GCGGCTTCGA CTTCAACAAG
AGCAAGTTCA ACCACGTGAC GCAGGCGTGG CGGCAGCCGG GCTCGTCGTT CAAGCCGTTC
ATCTACTCGG CGTCGCTCGA CAAGGGGCTC GGGCCGGCGA CGATGATCAA CGACGCGCCG
CTGTACTTCC CGCCGAGCGT GCCGGGCGGC ACCGCGTGGG AGCCGAAGGA CGACGACCAG
CCGGACGGCC CGATGACGAT GCGCACCGGT CTGCAGCGTT CGAAGAACCT GGTGTCGATC
CGGATCCTCG CGTCGATCGG CACGCAGTAC GCGCAGCAGT ACGTGACGCA GCGCTTCGGT
TTCGATCCGG CGAAGACGCC GCCGTACCTG CCGATGGCGC TCGGCGCGGG CCTCGTGACG
CCGCTGCAGC TCGCGACCGG CTACGCGGTG TTCGCGAACG GCGGCTACAA GGTCGATCCG
TACCTGATCG CCGAAGTCGA CGACGCGCGC GGCCAGCCGC TGCAGAAGTC GCAGCCGGTG
GTCGCGGGCG GCACGGCGCC GCGCACGATC GAAGGCCGCA ACGCGTACGT GATGAACAGT
CTGCTGCATT CGGTCGCGAC CGCCGGCACG GGCGCGGGCA CCAACGCGCT GGGCCGCAAC
GACCTGCAGG GCAAGACGGG TACCACGAAC GATGCGAAGG ACGGCTGGTT CGCCGGCTAT
CAGCAGTCGC TCGTCGCGGT TGCGTGGATG GGCTTCGATC AGCCGAAGAG CCTGGGCAGC
CGCGAATTCG GCGCGCAGCT CGCGTTGCCG ATCTGGGTGA ACTACATGCG CACCGCGCTG
AACGGCGTGC CCGAGCAGCA GATGCCGATG CCGGACGGCC TGACGACGAT CGACGGCGAG
CTGTACTACG CCGATCGGAC GCCGGGCAAC GGCTTCGTCG CGAACGTCGA CATCAACCCG
GCGGAGAACG CGATCAGCGC GAACGACGCC CTCGGTTCGG CCGGCGCGGC CGGGCTGGCG
CCACCGCCCG TCACGCCGCA GGAGAAGCAG CAGATCATGG ACATGTTCGA GAGCAAGTAA
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| Protein sequence | MPIIKRPPSS SDRNEPHYTL RRSPSGAYYP DDDDRDDGRR AQQSGGGGGR RRTFGSRVAL
WFVGLFATLA VVGALIVGYA LVVMAPQLPS LDALTNYQPK VPLRVFTADH VLIGEFGEER
RSLVRFQDIP DVMKKAVLAI EDYRFYEHGG VDFLGILRAG VADLMHGGAR QGASTITMQV
ARNFFLSSEK TYTRKIYEML LAYKIEKALT KDQILELYMN QIYLGQRSYG FAAAARVYFG
KDLKDITLAE AAMLAGLPKA PSAYNPVVNP KRAKVRQEYI LKRMLDIGYI TQPQYDQAIK
EEIHVRTPGN QYAVHGEYVA EMVRQMMYQQ YKDETYTRGL TVTTTINSAD QEAAYQAVRR
GILDYERRHG YRGPEASINL PAAGDERDEA IDDALADHPD NGDLQSAVVL SASPNAVEVQ
FVGGATTTIG PAGLRFVSAA LGARANNALR IKPGSVVRVL KDGKTGWQVV QLPQVEGALV
AIAPQDGAIR SLVGGFDFNK SKFNHVTQAW RQPGSSFKPF IYSASLDKGL GPATMINDAP
LYFPPSVPGG TAWEPKDDDQ PDGPMTMRTG LQRSKNLVSI RILASIGTQY AQQYVTQRFG
FDPAKTPPYL PMALGAGLVT PLQLATGYAV FANGGYKVDP YLIAEVDDAR GQPLQKSQPV
VAGGTAPRTI EGRNAYVMNS LLHSVATAGT GAGTNALGRN DLQGKTGTTN DAKDGWFAGY
QQSLVAVAWM GFDQPKSLGS REFGAQLALP IWVNYMRTAL NGVPEQQMPM PDGLTTIDGE
LYYADRTPGN GFVANVDINP AENAISANDA LGSAGAAGLA PPPVTPQEKQ QIMDMFESK
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