Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1970 |
Symbol | |
ID | 6123634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2193293 |
End bp | 2194312 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641638542 |
Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
Protein accession | YP_001765253 |
Protein GI | 170733306 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.297392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0488964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACTG AACAACAGGG CACTGCCCAT ACGACGATCG ACGGCGAGCC GATTCCGACG CTCGACGAAA TCGCCGCGCA GCATTTCGCG TTGTCACCCT GGGTCGCGCG CACGCCCGTG TTCGAGCGCG CCGACCTGCC CTCCCTCGAA GGCACGCACG TCAACTTCAA GTTCGAGCTG TTGCAGGCGA GCGGCAGCTT CAAGGCGCGC GGCGCGTTCA CGCACCTGCT CGCGCTCGAC GAAGACCGCA AGAACGCGGG CGTCACCTGC GTATCGGCCG GCAATCATGC GGCAGCCGTC GCGTATGCGG CGATGCGGCT CGGCAGCAGC GCGAAGGTCG TGATGTTCCA TACCGCGAGC CCGACGCGCA TCGCGCAGTG CAAGCAGTAC CGCGCGGAAG TCGTGCTGGC GGGCAGCGCG TCGCAGGCGT TCGATCTCGT GCGGCGCATC GAGGCCGAGG AAGGCCGCTT CTTCATTCAT CCGTTCAACG GCTATCACAC GATCCTCGGC ACCGCGACGC TCGGCTACGA ATGGGCGACG CAGACGCCGG ACCTCGACGC GGTGATCGTG CCGATCGGCG GGGGCGGGCT CGCGGCCGGC ATGGCGACCG CGCTGCGGCT CGCGAATCCG CGTGTGCACG TGTACGGCGT CGAGCCGGAA GGCGCCGACG CGATGAGCCG CAGCTTCGCG GCCAATCACA CGATCAAGAT GAGCGCGATG CAGACGATCG CCGATTCGCT GATGGCGCCG CACACCGAGG AATACAGCTA TCAGCTGTGC CGGCGCCACC TCGACCGCAT CGTCACCGTC TCCGACGACG CGCTGCGCGC CGCGATGCTG TTCCTGTTCT CGCACCTGAA ACTGTCGGTC GAGCCGGCCT GCGCAGCCGC GCTCGCAGCA CTCCTCGGCC CGCTGCGCGA AACGCTGCAG GGCAAGCGCG TCGGCGTGCT GCTGTCGGGC ACGAATACCG ACCCCGCCAC GCTCGGCATG CATCTCGCGC ACGCGCAACT GCAGCACTGA
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Protein sequence | MSTEQQGTAH TTIDGEPIPT LDEIAAQHFA LSPWVARTPV FERADLPSLE GTHVNFKFEL LQASGSFKAR GAFTHLLALD EDRKNAGVTC VSAGNHAAAV AYAAMRLGSS AKVVMFHTAS PTRIAQCKQY RAEVVLAGSA SQAFDLVRRI EAEEGRFFIH PFNGYHTILG TATLGYEWAT QTPDLDAVIV PIGGGGLAAG MATALRLANP RVHVYGVEPE GADAMSRSFA ANHTIKMSAM QTIADSLMAP HTEEYSYQLC RRHLDRIVTV SDDALRAAML FLFSHLKLSV EPACAAALAA LLGPLRETLQ GKRVGVLLSG TNTDPATLGM HLAHAQLQH
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