| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1958 |
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| Symbol | |
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| ID | 6124915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 2179114 |
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| End bp | 2180016 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641638530 |
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| Product | squalene synthase HpnD |
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| Protein accession | YP_001765241 |
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| Protein GI | 170733294 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0340477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.450684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCT CGACGTTTCG GCAGCGCGCC GCCGCGCGTC CCCCGAACCT GCCCCACCCG
ATCTCGCCCG TGAACTTCGA CGACTACTGT CAGCAAAAGG CCGCCCCCGC CGGCTCGAGC
GTCTACTACG CGCTGCGCCA GGCGCCGCTC GCCACGCAGC CGCGCCTGAC CGCGCTGTTC
GCGCTACGCC GCGAACTCGA GGAAACCGTC AAGGAAACCA GCGATCCGAC CGTCGGACAC
ACGAAGCTCG CGTGGTGGCA CAAGGAACTC GCCGCACTGG CCGACGGGCA GCCGTCGCAC
CCGGTCACGA AGGCGCTCGC ACAGCATCAT CCGGCGATCG CCGCCGAAGC CGACGCACTG
CGCACGCTCG TCAACGGTTA CGGGATGGAC CTCGAACAGG CGCGCTACCT CGACTTCGCG
AACCTGCAGC GCTATATCGC GCAGGTCGGC GGCACCTTCG CGTCGCTGGT CGCGCGCGCC
AGTTCGGCGA ACCCGGCCGA CCCGCAGCCG TGGGCCGCGG ACGTCGGCCG CGCGCTGATG
CTCGCGCAAT TCGTGCAGGA GCTCGGCAAC GACGCGCGCC ACGGCCGCAT CTATCTGCCG
ATCGACGAAC TGCAGCGCTA CAACGTGACC GCGGCCGATC TGCTGAACCG CCGCTACAGT
CCGGCCTTCA CCGAATTGCT GCAATTCCAG ACGACCCGCG CGCGCGACGC GCTCGCGGTG
GCCGATGCGG CGATTCCCGC CACTGAACGC CGCGCGCAGC GCACACTGCG GGCGCAAATC
GCGCTGGCCG GCGCGCTGCT CGACGAAATC GCGCGCGACG GCTACCAGGT GCTGCACCAG
CGCATCGCGC TCACACCGAT CCGCAAGCTG TGGATCGCGT GGCGCGCCGC GCGTCGCCGC
TGA
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| Protein sequence | MPRSTFRQRA AARPPNLPHP ISPVNFDDYC QQKAAPAGSS VYYALRQAPL ATQPRLTALF
ALRRELEETV KETSDPTVGH TKLAWWHKEL AALADGQPSH PVTKALAQHH PAIAAEADAL
RTLVNGYGMD LEQARYLDFA NLQRYIAQVG GTFASLVARA SSANPADPQP WAADVGRALM
LAQFVQELGN DARHGRIYLP IDELQRYNVT AADLLNRRYS PAFTELLQFQ TTRARDALAV
ADAAIPATER RAQRTLRAQI ALAGALLDEI ARDGYQVLHQ RIALTPIRKL WIAWRAARRR
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