Gene Bcenmc03_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1942 
Symbol 
ID6123606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2158283 
End bp2158951 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID641638511 
ProductGDSL family lipase 
Protein accessionYP_001765225 
Protein GI170733278 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGA CATTTCGCTG GAAAAGACGC GCGGCGACCG CCGCGCTGCT GGGCACCCTG 
CTGGCCGTCA CCGTGCCCGC GCGCGCCGCG ACGGCGCCGG CATCGGGCCC GCCCGTGATC
GTCGTGCTCG GCGACAGTCT CTCGGCCGAA TACGGCTTGC CGCGCGACAC CGGCTGGGTG
GCACTGCTGC GGCAACGGCT CACGACCGAG CGAATCGATT ATAGCGTCGC GAACGCCAGC
GTCAGCGGCG ACACCACGAG CGGCGGCCGT GCGCGGCTGC CCGCGGTGCT GCAGCGGCTC
AAGCCGTCGA TCGTCGTCGT CGAACTCGGC TCGAACGACG CGCTGCGCGG CGTACCACTC
GCGACGACCG AGCAGAACCT GCGCGACATC ATCGCCAGCG CCCAGCGCGC GCGGGCGAAG
GTCGTGCTGG TCGGCATGTA CGTGCCACCC AATTACGGCC CCGACTACAC GCAGAAGTTC
CACGCGGTCT ATACGCGGCT GTCGAAGGAT CTCGGCGTGC CGCTCGTGCC ATTCCTGCTG
GCCGGCATCG AGAACAAGCC CGAGATGTTC CAGGCCGACC AGATGCATCC CGCGCAGCAG
GCGCAGGGCG TCCTGCTCGA CAATGTGTGG CCGGCACTGA AGCCGTTGCT CGGCAAGCCG
CACGGCTGA
 
Protein sequence
MDTTFRWKRR AATAALLGTL LAVTVPARAA TAPASGPPVI VVLGDSLSAE YGLPRDTGWV 
ALLRQRLTTE RIDYSVANAS VSGDTTSGGR ARLPAVLQRL KPSIVVVELG SNDALRGVPL
ATTEQNLRDI IASAQRARAK VVLVGMYVPP NYGPDYTQKF HAVYTRLSKD LGVPLVPFLL
AGIENKPEMF QADQMHPAQQ AQGVLLDNVW PALKPLLGKP HG