| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1924 |
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| Symbol | |
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| ID | 6123588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 2131664 |
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| End bp | 2133142 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641638493 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001765207 |
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| Protein GI | 170733260 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.268801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.495061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCCC GTCGGACTGC CCCTTACGTC ATCGTGGCAA TTGCTTCCAT GATCGCGTGC
GCGCTCATGG CGCTATGCGT GCTGCAACTC TTGCAGAGCC GCGACGACGC GATGGAGCGT
GCAAGGGAAA CGTCACGCAA CCTCGGACTT GTCGCCGAGC GCGACATCGA ACGCAATTTC
GAGTTGTACG ACCTGTCTTT GCAAGCGGTC ATCCACGGGT TGCAACGCCG CGATGTGATG
GACGCTTCGC CCAGCTTGCG CCGTGCGGTG CTGTTCGATC ACGCGATGAC CGCGGAATTT
CTCGGTTCGA TGCTCGTGAT GGATGCAGGC GGCAATATCG TCCTGGATTC GGGCTATGAC
GAGCCGCGCA AGGGCAATTT CGCCGACCGC CGATACTTCA CGATCCACCG CGACAATCCG
AACGTCGGAC TCTATATCAG TGACCCATTC GTATCCCGTT TGCGTGGGGG AAAGCTCAGT
ATCGCGCTCA CGCGGCGGAT TTCGAACCCC GATGGATCGT TTGGCGGCAT TGCCGTTATC
GCGGTCAATC TCGAATATTT CCACCAGCTC TTCGCAGGGC TTTCGCTTGG CAAACACGGC
TCGATCTCGC TGATCGGCGA GGACGGCAAG ATGGTGATGC GTCAGCCGTA CGATGTGCAT
ACTATCGGCC GCGACCTCAG CAAAGCGGCA ACATTCCGGC GGTTTCAGAC CGCGCGCGAG
GGCTCCTTCT CTGAAACCTC ATCGATCGAC GGCGTACGCC GCCTTTACTA CTTCAAGCAT
TTGCCGAAAC TGCCGCTGAT CATCATGGTC GCGGAGGCCG AGCAGGACAT TTACGCCGCC
TGGCGGCAAC GTGCGATCAC GATCGGCGGA CTGGTCGCGA CGTTCGGGGT GGCGTTCATC
GCGCTGTCGC TGCTGCTCGG TTCGCAGCTG CGGCGCCGTA TGCGGGCCGA GTCGGAACTC
GTGCTGCTCG CCCGGACGGA CGGTCTCACC GGCCTGAGCA ATCGCCGCAG CTTTGGCGAG
GTACTGGACA ACGAGTGGCG TCGCGCCCGG CGTGCGCGTT CCGTTTTCTC GCTGCTGTTC
GTGGATGTGG ACCGGTTCAA GGCTTACAAC GACACGTACG GTCATCAGGC CGGGGACGAT
GCGTTGGCGG CGGTCGCGCG CTGCATCGGC GAGAACATTC GCCGGCCGGC CGATACGGCG
GCTCGTTATG GCGGGGAGGA GTTCGTCGTG TTGCTCCCCG ACACGTCGCA AACCGGCGCG
GCGCAGATCG CCGAGCGGAT TCGCGCAGCC ATCGACGAGT TGGCCCTCGA GCACGCTGGC
AGCGAATACG GGCGTGTTAC CGCGAGCATT GGCCTGGCGA GCTGGACGCC CGAACAGGAA
GGGCAGCCCG ATGCCGTGAT CAAGGCGGCT GATGAGGCGC TGTACTACGC GAAGGCGACT
GGTCGGAACA AGGTCGCCGC ACTGCAGCCG GCGCAGTGA
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| Protein sequence | MHPRRTAPYV IVAIASMIAC ALMALCVLQL LQSRDDAMER ARETSRNLGL VAERDIERNF
ELYDLSLQAV IHGLQRRDVM DASPSLRRAV LFDHAMTAEF LGSMLVMDAG GNIVLDSGYD
EPRKGNFADR RYFTIHRDNP NVGLYISDPF VSRLRGGKLS IALTRRISNP DGSFGGIAVI
AVNLEYFHQL FAGLSLGKHG SISLIGEDGK MVMRQPYDVH TIGRDLSKAA TFRRFQTARE
GSFSETSSID GVRRLYYFKH LPKLPLIIMV AEAEQDIYAA WRQRAITIGG LVATFGVAFI
ALSLLLGSQL RRRMRAESEL VLLARTDGLT GLSNRRSFGE VLDNEWRRAR RARSVFSLLF
VDVDRFKAYN DTYGHQAGDD ALAAVARCIG ENIRRPADTA ARYGGEEFVV LLPDTSQTGA
AQIAERIRAA IDELALEHAG SEYGRVTASI GLASWTPEQE GQPDAVIKAA DEALYYAKAT
GRNKVAALQP AQ
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