Gene Bcenmc03_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1913 
Symbol 
ID6123577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2122535 
End bp2123245 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID641638482 
Productankyrin repeat-containing protein 
Protein accessionYP_001765196 
Protein GI170733249 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0270531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGC CGACCAACCA TCTGCCCAAA CGCGCACTCG TTGCCGCCGC ATTCGTCGCG 
AGCGGGCTGT TCGCCGCCGC CGGCGCGCAC GCCGAGTCGC TCGACGCGAT CGTCAAGGCC
GTCAAGTTCG ACGACATCGC CGATATCGGC AAGCAGCTCA AGAGCGGCAA GCTCGATCCG
AACACGCTCG CGCCGAACGG CGACCCGATC CTCGTGATCG CCGCCCGCGA GAAATCCGAC
AAGGTCGCGG CCGCGATCGC CACGACGCCG AACGTCGATC TCGAGAAGGA AGACAAGGCC
GGCGAAAACG CGCTGATGCT CGCGTCGCTG AACGGCGACC TCGGGCTCGT CAAGCTGCTG
ATCGACAAGG GCGCGGAAGT CAGCAAGAAG GGCTGGGCGC CGCTGCATTA CGCGGCGACC
AACGGCCAGG ACGCGGTCGT CAAGGTGCTG CTCGACCACG ACGCGTACAT CGACACCGCA
TCGCCGAACG GCACGACGCC GCTGATGATG GCCGCGCGCG GCAACCATGC GTCGACGGTC
ACGCTGCTGC TCGACCAGGG CGCCGATCCG CAGGTGAAGA ACCAGCTCGG CATCACCGCG
CTCGAGTTCG CGAAGCACTA CAACGCGCCG GACGCGATCG AGATCCTGAG CAAGCGGACG
ACGCGTATCG GTGCGGCGAC GCCGGCAGAT GCGCAAAAGA GTGCAAAATA A
 
Protein sequence
MTKPTNHLPK RALVAAAFVA SGLFAAAGAH AESLDAIVKA VKFDDIADIG KQLKSGKLDP 
NTLAPNGDPI LVIAAREKSD KVAAAIATTP NVDLEKEDKA GENALMLASL NGDLGLVKLL
IDKGAEVSKK GWAPLHYAAT NGQDAVVKVL LDHDAYIDTA SPNGTTPLMM AARGNHASTV
TLLLDQGADP QVKNQLGITA LEFAKHYNAP DAIEILSKRT TRIGAATPAD AQKSAK