Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1879 |
Symbol | |
ID | 6123543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2088020 |
End bp | 2089258 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641638448 |
Product | aminotransferase AlaT |
Protein accession | YP_001765162 |
Protein GI | 170733215 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.123534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000142896 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAACCGA TTCAGAAGTC GAACAAGCTG CTCAACGTCT GCTACGACAT CCGTGGCCCG GTGCTCGAGC ACGCGAAGCG CCTCGAGGAA GAAGGCCACC GCATCATCAA GCTGAACATC GGCAACCTCG CGCCGTTCGG TTTCGACGCG CCGGACGAGA TCATCCAGGA CATGATCCGC AACCTGCCGG CGTCGTCCGG CTATTCGGAT TCGAAGGGCG TGTTCTCGGC GCGCAAGGCG GTGATGCACT ACACGCAGGA AAAGGGCGTC GTCGGCGTCG GCCTCGACGA CATCTACATC GGCAACGGCG CGTCCGAGCT GATCGTGATG GCGACCCAGG CGCTGCTGAA CGACGGCGAC GAAGTGCTGC TGCCCGCGCC CGACTACCCG CTGTGGACGG CGGCCGTGAG CCTGTCGGGC GGCACGCCCG TGCACTACGT GTGCGACGAG CAGAACGCGT GGATGCCCGA TCTCGACGAC ATCCGAAGCA AGATCACGCC GAACACGAAG GCGATCGTCG TGATCAACCC GAACAATCCG ACCGGCGCGC TTTATTCCGA CGAATTGCTG CTCGAACTGC TCGAGATCGC GCGCCAGCAC GGGCTGATCG TGTTCGCCGA CGAGGTCTAC GACAAGATCG TCTACGACGG CCTCGAGCAC ACGGCGCTGG GTTCGCTGTC GGAGGACGTG ATCACCGTCA CGTTCAACAG CCTGTCGAAG AGCTATCGGT CGTGCGGCTA CCGCGCGGGC TGGATGGCCG TGTCGGGCCT CGGCGGCGAC AACCGCCGGC GCGCGAAGGA CTACCTCGAA GGGCTCGGCA TCCTGTCGTC GATGCGTCTG TGCGCGAACG TGCCCGGCCA GTTCGCGATC CAGACGGCGC TCGGCGGCTA CCAGAGCATC AACGAGCTGA TCGTGCCGAG CGGGCGCCTG TACAAGCAGC GCGAACTCGC GTATGACATG CTGACGTCGA TCCCGGGCGT GACCTGCGTG AAGCCGCAGG CCGCGCTGTA CATGTTCCCG CGCCTCGACC CGAAGCTCTA CCCGATCCAG AACGACCAGC AGTTCATTCT CGACCTGTTG CTCGAGGAGC GCGTGCTGCT CGTACAGGGC ACGGGTTTCA ACTGGGCGAC GCCGGACCAC TTCCGCGTGG TCTTCCTGCC GAACCTCGAC GACCTGGCCG ATTCGATCAA CCGGATCGCA CGCTTCCTCG ACGGCTACCG CAAGCGCCAT TCGGTCTGA
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Protein sequence | MKPIQKSNKL LNVCYDIRGP VLEHAKRLEE EGHRIIKLNI GNLAPFGFDA PDEIIQDMIR NLPASSGYSD SKGVFSARKA VMHYTQEKGV VGVGLDDIYI GNGASELIVM ATQALLNDGD EVLLPAPDYP LWTAAVSLSG GTPVHYVCDE QNAWMPDLDD IRSKITPNTK AIVVINPNNP TGALYSDELL LELLEIARQH GLIVFADEVY DKIVYDGLEH TALGSLSEDV ITVTFNSLSK SYRSCGYRAG WMAVSGLGGD NRRRAKDYLE GLGILSSMRL CANVPGQFAI QTALGGYQSI NELIVPSGRL YKQRELAYDM LTSIPGVTCV KPQAALYMFP RLDPKLYPIQ NDQQFILDLL LEERVLLVQG TGFNWATPDH FRVVFLPNLD DLADSINRIA RFLDGYRKRH SV
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