| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1866 |
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| Symbol | |
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| ID | 6123530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 2074395 |
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| End bp | 2076314 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641638435 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001765149 |
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| Protein GI | 170733202 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.102196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00350069 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCTACG CCGTCCCCCA GGCCCAGCAC GCCGATCGTG TCCTCGGCGC GCTCGCCGGA
CGCCTGCCCG CGCCGGCGGA TTCCGCGCGT CTCGTGTCGT CGTGGCAACG ATCGCTGGAG
CGCTACCGTC TCGACCCCGC TTCGTCGATC GGCCCGCGCG TGCTGACCGC GGCCGAGCTG
CGCGAGGTGC GCGACAAGGA GGAAGCCTTC CTGCGCGCGT CGGGCCAGTG CCTGACGCGG
CTGCACGACA TGATCCGCGT CGCCGACTAC TGCGTGATGC TGACCGATGC GCACGGCGTG
ACGATCGACT ACCGGATCGA CCGCGAACGC CGCAACGACT TCCGTCACGC GGGGCTGCAC
ATCGGCTCGT GCTGGTCGGA AAGCGAGGAA GGAACCTGCG GGGTCGCGAG CGTGCTGACC
GATCTCGCAC CGATCACCGT GCACAAGACC GATCACTTTC GCGCGGCGTT CACGACACTC
ACCTGCAGCG CGGCGCCGAT CTTCTCGCCG GGCGGCGAAC TGATCGGCGT GCTCGACGCG
TCGGCCGTGC ATTCGCCCGA CGGCCGCGAC AGCCAGCGCC TCGTCTACCA GCTCGTGCGG
CAGAGCGCGG CGCTGATCGA GGACGGCTAC TTCGTGCACA GCACCGCGCA GCACTGGATA
TTGTTCGGGC ATCCGAACCG TCACTACGTC GAGGCGCAAC CGGAGTGGCT GATTGCGTTC
GACGAATGCG GCAACATCGT CGCCGCGAAC CGGCACGCGC GCGACGCGCT GCCGGCGCTG
CGCGAGCCGC GCCATATCGA CGAGATCTTC GACGCGACCG AGATGCCGCT GCGCGATGCG
GCGCGGCTCG ATGCCATCGT CGCGCTGCGG GTGCGCGCGA CCGGCGCACC GCTCTACGCG
CGGCTGCGCG CGCCGCTACG ACGCGCCGGC CGCGACCCCG GCGCGGCATC GCGCCGCCCG
GGCACCACCG CGCCGCGTCA CGTCGGCGCG CTGACGCCGT TCCTGCACAG CAGCGATGCG
CGCATCGCGC AACAGGCCGA ACTCGCGCTG CGCGTCGCGA GCAAGCGGCT GCCGATCCTC
GTGCTCGGCG AAACCGGCGC GGGCAAGGAA GTGTTCGCCC GTGCGATCCA CGACGCCGGC
GCACGGCGCG CGCGGCCGTT CGTCGCCGTC AACTGCGGCG CGCTGCCGGA AGCGCTGATC
GAGAGCGAAC TGTTCGGTTA TGCGGCCGGC GCGTTCACCG GCGCACGCAA GCACGGCGCG
CGCGGCAAGA TCGCGCTCGC CGACGGCGGC ACGCTGTTTC TCGATGAAAT CGGCGACATG
CCGCTCGCGC TGCAGACGCG CCTGTTGCGC GTCCTGGCCG ACGGCGAGGT CGTGCCGCTC
GGCAGCGATA CGCCCGTGCG CGTCGATCTC GACGTGATCT GCGCGACGCA CCGCGATCTC
GCGCGGATGG TGGCCGACGG CACGTTCCGC GAAGATCTGT ACTACCGGCT GAGCGGCGCG
ACGTTCGACC TGCCGCCGCT GCGCGAACGC GCGGACGTGC GCGACGTGAT CGCCGCCGTG
TTCGCCGAGG AAGCGCAGGC GACCGGCCAC GTGCTCACGC TCGACGCGAC GCTCGCCGAA
CAGCTCGCCG CGTATCCATG GCCGGGCAAC GTGCGGCAAC TGCGCAACGT GCTGCGCTAT
GCGTGCGCGG TGTGCGACGC CGCGCGCGTG ACGCGGCGCG ACCTGCCGAC CGACCTCGCC
GCGCAACTCG GCGGCGCCCC GGCGGGCGCG CTGCCAGACG ACGAACGCAG CCGCATCGTC
GCCGCGCTCA CCACGCATCG CTGGCGGCCC GACGCGGCCG CCCGGGCGCT CGGCATCTCG
CGCGCGACGC TGTACCGGCG CATCGCGAAG TACCGGATCG TCGCGCCGCA CCGCGCGTGA
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| Protein sequence | MPYAVPQAQH ADRVLGALAG RLPAPADSAR LVSSWQRSLE RYRLDPASSI GPRVLTAAEL
REVRDKEEAF LRASGQCLTR LHDMIRVADY CVMLTDAHGV TIDYRIDRER RNDFRHAGLH
IGSCWSESEE GTCGVASVLT DLAPITVHKT DHFRAAFTTL TCSAAPIFSP GGELIGVLDA
SAVHSPDGRD SQRLVYQLVR QSAALIEDGY FVHSTAQHWI LFGHPNRHYV EAQPEWLIAF
DECGNIVAAN RHARDALPAL REPRHIDEIF DATEMPLRDA ARLDAIVALR VRATGAPLYA
RLRAPLRRAG RDPGAASRRP GTTAPRHVGA LTPFLHSSDA RIAQQAELAL RVASKRLPIL
VLGETGAGKE VFARAIHDAG ARRARPFVAV NCGALPEALI ESELFGYAAG AFTGARKHGA
RGKIALADGG TLFLDEIGDM PLALQTRLLR VLADGEVVPL GSDTPVRVDL DVICATHRDL
ARMVADGTFR EDLYYRLSGA TFDLPPLRER ADVRDVIAAV FAEEAQATGH VLTLDATLAE
QLAAYPWPGN VRQLRNVLRY ACAVCDAARV TRRDLPTDLA AQLGGAPAGA LPDDERSRIV
AALTTHRWRP DAAARALGIS RATLYRRIAK YRIVAPHRA
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