Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1844 |
Symbol | |
ID | 6123508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2049944 |
End bp | 2051032 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641638413 |
Product | RNA polymerase sigma factor RpoS |
Protein accession | YP_001765127 |
Protein GI | 170733180 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.104174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAAT CGAAGCGCCA CGAGCCGCAA GCCGAGTCTG AGAAGATCAG TCGTGCCACG CAAGCATCGG TGGGGCGAGT GGGCGCTTCG ACGGACGACG AAGAGGATGT CGCGGAAAAC GAACGTGATC TCGAGGCACG CGACGCCGAC GCGGACGGTG GCGACGACGA GCGCGAAGGC CGCCAGGAAG CCGCGCCCGA CGTCGACGAT TTCCGCACGC TGCTGCAGGC CGAGCTCACG GCCGACACGA TCCAGCACTA CCTGAACCGC ATCAGCGTGA AGCCGCTGCT GACCGTCGAG GAAGAGCAGC GCTATTCGCG TCTCGCGAAG GCCGGCGAAT TCGAGGCGCG GCAGGTGATG ATCGAGCGCA ATCTGCGGCT CGTCGTCAGT ATCGCGAAGG GCTATCTGAA CCGCGGCGTG CCGCTGCTCG ACCTGATCGA GGAAGGCAAC CTCGGCCTGA TGCATGCGAT CGAGAAATTC GACCCGACGC GCGGTTTCCG TTTCTCGACC TACGCGACGT GGTGGATCCG CCAGAGCATC GAGCGGGCAA TCATGAACCA GGCCCGCACG GTGCGCCTGC CGGTGCACGT GATCCGCGAA CTGAACCAGG TGCTGCGCGC GAAGCGCCAC CTCGAAAAGA ATTCGATGTC GACGGGCGAG GCGGCCGAAC GCCGCGAAGC CAGCATCGAC GACATCGCCT ATCTCACCGG CAAGACCGCC GAGGAAGTCA CCGATATCCT CGCGCTCAAC GAGCACACGG CGTCGCTCGA TGCGCCGCTC GACCTCGATC CCGCGAGCAG CCTGCTCGAC TTGCTGCCCG ACGACCAGAG CCAGTCGCCC GACGCCGAGG TGCAGCACCG CGAGCTCGAA ACGCTGACGC GCGCGTGGCT GTCGCGTCTG TCCGACAAGC ACCGGCACGT GATCGAGCGC CGCTTCGGCC TGAACCACAT CGAACCGGCG ACGCTCGAGG AGCTCGCCGA CGAGATGGGG CTCACGCGCG AGCGCGTGCG GCAGATCCAG CAGGAAGCGC TGGTGCGCCT CAAGCGGTTC TTCGCCTCCA ACGGCGTGCG CAAGGACGCC GTTCTGTAA
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Protein sequence | MPKSKRHEPQ AESEKISRAT QASVGRVGAS TDDEEDVAEN ERDLEARDAD ADGGDDEREG RQEAAPDVDD FRTLLQAELT ADTIQHYLNR ISVKPLLTVE EEQRYSRLAK AGEFEARQVM IERNLRLVVS IAKGYLNRGV PLLDLIEEGN LGLMHAIEKF DPTRGFRFST YATWWIRQSI ERAIMNQART VRLPVHVIRE LNQVLRAKRH LEKNSMSTGE AAERREASID DIAYLTGKTA EEVTDILALN EHTASLDAPL DLDPASSLLD LLPDDQSQSP DAEVQHRELE TLTRAWLSRL SDKHRHVIER RFGLNHIEPA TLEELADEMG LTRERVRQIQ QEALVRLKRF FASNGVRKDA VL
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