| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1831 |
|---|
| Symbol | hfq |
|---|
| ID | 6123495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2036233 |
|---|
| End bp | 2036472 |
|---|
| Gene Length | 240 bp |
|---|
| Protein Length | 79 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641638400 |
|---|
| Product | RNA-binding protein Hfq |
|---|
| Protein accession | YP_001765114 |
|---|
| Protein GI | 170733167 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1923] Uncharacterized host factor I protein |
|---|
| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.781797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.415294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA AAGGGCAATT GTTACAAGAC CCGTTTTTGA ACGCACTGCG CAAAGAGCAC
GTTCCCGTTT CGATCTACCT CGTCAACGGC ATCAAGCTTC AAGGGAACAT TGAATCGTTC
GACCAGTACG TCGTGTTGCT CCGTAATACG GTGACCCAGA TGGTTTACAA GCACGCCATC
TCGACGGTCG TGCCGGCGCG CCCGGTGAAT TTCCACCCGG ACGCGGAAGC CTCGTCCTAA
|
|---|
| Protein sequence | MSNKGQLLQD PFLNALRKEH VPVSIYLVNG IKLQGNIESF DQYVVLLRNT VTQMVYKHAI
STVVPARPVN FHPDAEASS
|
|---|
| |