Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1797 |
Symbol | |
ID | 6123463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1997458 |
End bp | 1999755 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641638368 |
Product | AsmA family protein |
Protein accession | YP_001765082 |
Protein GI | 170733135 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.374116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTAA CCCGAGCCAT CGGCAAATCG GCTGCATGGA TCGTCGGTAT CGTCGCGGTG CTCATCGCGG CGGCCGGCAT CTTTATCTTC ACGTTCGACT GGAACCGCGC GAAACCGTGG GTCAACGAAC AGGTGAGTAC CGCGCTCGGC CGCCCGTTCG CGATCAACGG GGATCTCAAG GTCGGCTGGC GTCGCCCCGA TGGCGAGACC GGCTGGCGCG CATGGGTGCC CTGGCCGAGC TTCTCCGCCA CGCAACTCGA GATCGGCAAT CCCGACTGGG CGCAGGCGCC CAAGTTCGTC ACGCTCGATG CCGCCCACTT CGATCTCGCG CTCCTGCCGC TGCTGGCGCA TGAAATCGTC ATCCCGTCGA TCGACGTCGT GAATCCTGCC GTCGATCTCG AACGGCGCGC GGACGGCAGC AATACGTGGA CCTTTCAGTT CAAGCAATCG TCGCAGCCTT CGCGCTGGAA GGTGCGGCTC GACAGCTTCG GTTTCGCGAA GGGCACCGTC ACGTATCGCG ATGCGATCAC TAAGGCCGAC CTGACCGTCG CGATCGATAC GCTCGGCCAG CCGATTCCGC TCGGCGACGT GCTGAAGGAG CAGGAGCAGA CCTCGCGTGC GGCGTCGGCG CAGCGCGTCG GCAAGCATGG CGCCGCGCAA CTGGGCGCGA AGGCCGATGC GCAAGCCGCC TCGGGGGCGT CGGGCGCGAG TGCGGCCGCG GCCTCGGGGG CGTCGGCTGC GAGCGGCGTT GCTTCGCCTG CTTCAGCTTC GTCCGGTTCA TTCGCTTCGT CCGCGCCTTC CGCGTCGGCG GCCGCTGCCG CGTCCGGCGC GAGCGGGGCC GCGGCGCCCG CGAAGCCGTC CGGCCCCACC TATGCGTTCG GGCTGAAGGT CGACGGCCGC TACAAGAACG TGCCGATCAG CGGCACCGGC AAGGTCGGCG GCGTGCTCGC GATCCAGGAT ACGTCGCAGC CGTTCCCGCT GCAGGCCGAC GTGAAGGCCG GCGATACGCG GCTCGCGATC GTCGGCACGC TGACCGATCC GAGGCATCTC GCCGCGCTCG ACCTGCGGCT GTGGCTGCAG GGCACGTCGA TGTCGCATCT TTACCAGCTC ACCGGCATCA CGCTGCCCGA TACGCCGCCT TACGCGACCG AAGGCCGCTT GATCGGCAAC TTCAAGCCGA ACGCGAGCAC GTTCCGCTAC GAGAACTTCA ACGGTCGCGT CGGCGGCAGC GATCTCGGCG GCACGCTCAC CTGGGCGCAG CGCGAGCCGC GGCCGAAGCT GTCGGGCGAA CTCGTGTCGA ACCTGCTGCA GTTCTCCGAT CTCGCGCCGG TGATCGGCGC CGACTCGGCC GCGAGCAAGA AGAAGCGCGG CGACACGACG CGCCAGCCGC CTGACCGCGT GCTGCCGGTC GCGGCGTTCC GCACCGAACG GTGGAGCGCG ATCGATGCGG ACGTGAAGTT CACCGGTCGC AAGTTGATCA AGAGCGCGGA CCTGCCGATC ACGAACCTGT ACACGCACAT TCTGATGCAG GATGGCGTGC TGACGCTGGA GCCGCTGCAG TTCGGCGTCG CGGGCGGCAC GCTCGCGACG AATGCGCATC TCGACGGCAG CCGCACGCCG CTCAAGGGCC GCTTCACGCT GGCCGCGCGG CATCTGAAGC TCAAGCAGCT GTTCCCGACG CAGAAGGTGA TGCAGACGGC GTTCGGCGAA ATCAACGGCG ACGCATCGCT GTCGGCAACG GGCAATTCGC CGGCCGCGCT CGCGGCGACG TCGACCGGCG AAGTGAAGGC GCTCATCACC AACGGCCGGA TCAGCCGCCT GCTGATGGAG GCCGCGGGGT TGAACGTCGC GAACGTCGTC TACGAGAAGC TGTTCGGCAA CCGCGACGTC AACATCAATT GCGCGGCGAT CGATTTCGTC GCGACCGACG GCATGCTCGA CCCGAAGGTC TTCGCGCTCG ATACCGACGA TGCGCTCATC AACGTCGACG GCCCGATCAA CTTGCGCGAC GAATCGCTCG ACCTGAAGAT CCATCCGCAC ACGAAGGGCT TCCGGATCTT CTCGCTGCGC TCGCCGTTGT ATGCGAAGGG CACGTTCAAG AACCCGAAGG TCGGCGTCGA TGCCGGCGCG CTCGCCCTGC GCGCCGGCGC GATGGTCGGG CTCGGGCTGA TCAACCCGTT CGCGGCGCTG ATCCCGCTGA TCGCGCCGAG CAACAACCGC GACGTGCCGT GCTCGGAACT GTTCGGGCAG ATGAAGGCGC AGGCGGCGCA GAAAGCGGCC AAGAAGGCCG GCAAGTGA
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Protein sequence | MTLTRAIGKS AAWIVGIVAV LIAAAGIFIF TFDWNRAKPW VNEQVSTALG RPFAINGDLK VGWRRPDGET GWRAWVPWPS FSATQLEIGN PDWAQAPKFV TLDAAHFDLA LLPLLAHEIV IPSIDVVNPA VDLERRADGS NTWTFQFKQS SQPSRWKVRL DSFGFAKGTV TYRDAITKAD LTVAIDTLGQ PIPLGDVLKE QEQTSRAASA QRVGKHGAAQ LGAKADAQAA SGASGASAAA ASGASAASGV ASPASASSGS FASSAPSASA AAAASGASGA AAPAKPSGPT YAFGLKVDGR YKNVPISGTG KVGGVLAIQD TSQPFPLQAD VKAGDTRLAI VGTLTDPRHL AALDLRLWLQ GTSMSHLYQL TGITLPDTPP YATEGRLIGN FKPNASTFRY ENFNGRVGGS DLGGTLTWAQ REPRPKLSGE LVSNLLQFSD LAPVIGADSA ASKKKRGDTT RQPPDRVLPV AAFRTERWSA IDADVKFTGR KLIKSADLPI TNLYTHILMQ DGVLTLEPLQ FGVAGGTLAT NAHLDGSRTP LKGRFTLAAR HLKLKQLFPT QKVMQTAFGE INGDASLSAT GNSPAALAAT STGEVKALIT NGRISRLLME AAGLNVANVV YEKLFGNRDV NINCAAIDFV ATDGMLDPKV FALDTDDALI NVDGPINLRD ESLDLKIHPH TKGFRIFSLR SPLYAKGTFK NPKVGVDAGA LALRAGAMVG LGLINPFAAL IPLIAPSNNR DVPCSELFGQ MKAQAAQKAA KKAGK
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