| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1607 |
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| Symbol | |
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| ID | 6123283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1777694 |
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| End bp | 1778362 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641638188 |
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| Product | extracytoplasmic-function sigma-70 factor |
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| Protein accession | YP_001764902 |
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| Protein GI | 170732955 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.483087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0648127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCATGG CGGAAGTGCT CGACCGACCG GCGGCGGCAG CGGCAAACCC GTTCCTCGGC
AGTTATCCGG ACCTGCCGCC GCGCGCCGCG CCGCGTGCGC GCCGGGCGTC CCAGCCCGCT
GCGCAGGGCG CGCTGCTCGA CGTGCTGATC TCGCATCGCG CGATGCTGGT CAACGTCGCG
CGCGGCTTCG TCGGCTGCGC GAGCCGCGCG GAAGACGTCG TGCACGACGT GTTCGTGAAG
CTCGTCGAAT TCCCGAACCA GGACGCAGTG CGCCAGCCGG TCGCGTACGT GACGCGGATG
GTGCGCAATG CGTCGATCGA CGCGTGCCGC CGGCAAAGCC TCGAAAACGT CTATCACACG
GAAGAGGACG ACGGCTTCGA CGTGCCGTCG CCCGAGCCGA CGCCGGAAGC CGCGCTGATG
ACGCGCGATA CGCTGCGGCG CGTGTGGGCC GCGCTCGACG ACCTGCCGGC GCGCAGCCGG
GCGGCGTTCG AGATGGTGCG GCTGCGTGAG GAGACGCTGC AGACTGCTGC GCGTGCGCTG
AACGTGTCGC AGACGCTCGT GCACTTCATG GTGCGCGACG CGGAACGCCA CTGCGCGGAA
TGCCTCGACG CGTGCCATCG CGGCGTCGCG TGCCCAGTGT TCCTGGGCGG CCGCGCGCGG
CGGCGGTAA
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| Protein sequence | MAMAEVLDRP AAAAANPFLG SYPDLPPRAA PRARRASQPA AQGALLDVLI SHRAMLVNVA
RGFVGCASRA EDVVHDVFVK LVEFPNQDAV RQPVAYVTRM VRNASIDACR RQSLENVYHT
EEDDGFDVPS PEPTPEAALM TRDTLRRVWA ALDDLPARSR AAFEMVRLRE ETLQTAARAL
NVSQTLVHFM VRDAERHCAE CLDACHRGVA CPVFLGGRAR RR
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