| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1599 |
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| Symbol | |
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| ID | 6123275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1766424 |
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| End bp | 1769564 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641638180 |
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| Product | multidrug efflux protein |
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| Protein accession | YP_001764894 |
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| Protein GI | 170732947 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.533653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTT TCTTCATCGA TCGCCCCATC TTCGCGTGGG TGATCGCCAT CTTCATCATG
CTGGGCGGCC TGTTCGCGAT CCGTGCGCTG CCCGTCGCGC AGTACCCGGA CATCGCGCCG
CCCGTCGTCA GCATCTATGC GACGTATCCG GGCGCGTCCG CGCAGGTCGT CGAGGAATCG
GTGACCGCGC TGATCGAGCG CGAGATGAAC GGCGCGCCGG GGCTGCTGTA TACATCCGCG
ACGAGCAGCG CCGGCGCGGC GTCGCTGTAC CTGACGTTCA AGCAGGGCGT GAACGCCGAT
CTCGCGGCCG TCGAAGTGCA GAACCGGCTG AAGACGGTCG ATGCGCGCCT GCCCGAGCCG
GTGCGCCGCG ACGGCATCCA GGTCGAGAAG GCCGCCGACA ACATCCAGCT CGTCGTGTCG
CTGACCTCCG ACGACGGCCG GATGACCGAC GTGCAGCTCG GCGAATACGC GTCGGCGAAC
GTCGTGCAGG CGTTGCGCCG CGTCGAGGGT GTCGGCAAGG TGCAGTTCTG GGGCGCCGAA
TATGCGATGC GGATCTGGCC CGACCCGGTG AAGCTGGCCG GGCATGGCCT CACCGCGTCG
GACATCGCAT CGGCCGTGCG TGCGCACAAC GCGCGCGTGA CGATCGGCGA CATCGGCCGC
AGCGCGGTGC CGGACAGCGC GCCGATCGCG GCGACGGTGT TCGCGGACGC ACCGCTGAAG
ACGCCGGCCG ATTTCGGCGC GATCGCGCTG CGTGCGCAAC CCGACGGCTC CGCGCTGTTC
CTGCGCGACG TCGCACGCAT CGAGTTCGGC GGCAACGACT ACAACTATCC GTCGTACGTG
AACGGCAAGG TCGCGACCGG GATGGGCATC AAGCTCGCGC CGGGCTCGAA CGCGGTGTCC
ACCGAGAAGC GCGTGCGCGC GACGATGGAC GATCTGTCCA GGTACTTCCC GCCGGGCGTG
AAATACCAGA TTCCGTACGA GACGTCGTCG TTCGTGCGCG TGTCGATGAA CAAGGTCGTC
ACGACGCTGA TCGAGGCCGG CGTGCTGGTG TTCCTCGTGA TGTTCCTGTT CATGCAGAAC
CTGCGCGCGA CGCTGATTCC GACACTCGTC GTGCCGGTCG CGCTCGCGGG CACGTTCGGC
GTGATGTACG CGGCCGGCTT CTCGATCAAC GTGCTGACGA TGTTCGGGAT GGTGCTCGCG
ATCGGCATCC TCGTCGACGA CGCGATCGTC GTCGTCGAGA ACGTCGAGCG GCTGATGGTC
GAGGAAGGGC TCGCGCCGTA CGACGCGACC GTCAAGGCGA TGCGGCAGAT CAGCGGCGCG
ATCGTCGGGA TCACCGTGGT GCTGACGTCG GTGTTCGTGC CGATGGCGTT CTTCGGCGGC
GCGGTGGGCA ACATCTACCG GCAGTTCGCG CTGTCGCTCG CGGTGTCGAT CGGCTTCTCG
GCGTTCCTCG CGCTGTCGCT GACGCCCGCG CTGTGCGCGA CGCTGCTCAA GCCGGTGTCG
GGCGACCATC ACGAGAAGCG CGGCTTCTTC GGCGGGTTCA ACCGCTTCGT CGCGCGGGCG
ACGCAGCGCT ACGCGACGCG GGTCGGCACG ATGCTGAAGA AGCCGGTGCG CTGGCTCGTC
GTGTACGGCG CGCTGACTGC GGCGGCCGCG CTGATGCTCA CGCAGCTGCC GACCGCGTTC
CTGCCGGACG AGGACCAGGG CAACTTCATG GTGATGGTGA TCCGCCCGCA AGGCACGCCG
CTCGCGGAGA CGATGCAGAG CGTGCGCGCG GTCGAGTCGG CCATCCGCCG CGACGAACCG
ACCGCCTATA CGTATGCGCT CGGCGGCTTC AACCTGTACG GCGAAGGGCC GAACGGCGGG
ATGATCTTCG TCACGCTGAA GAACTGGAAG GAACGCAAGG CCGAGCGCGA TCACGTGCAG
TCGATCGTCG CGCGCATCAA CGAGCGCTTC GCGGGCACGC CGAACACGAC GGTGTTCGCG
ATGAACTCGC CGGCGCTGCC CGATCTCGGT TCGTCGAGCG GCTTCGACTT CCGGCTGCAG
AACCGCGGCG GGCTCGACTA CGCGACGTTC AGCGCCGCGC GCGAGCAACT GCTCGCGGCG
GGCGGCAAGG ATCGCGCGCT CACCGACCTG ATGTTCGCGG GCACGCAGGA CGCGCCGCAA
CTGAAGCTCG ACATCGATCG CGCGAAGGCG TCCGCGCTCG GCGTGTCGAT GGACGAGATC
AACACGACGC TCGCGGTGAT GTTCGGCTCC GACTATATCG GCGACTTCAT GCACGGCACG
CAGGTGCGGC GCGTGATGGT GCAGGCCGAC GGGCGGCACC GGCTCGATCC GGACGACGTG
AAGAAGTTGC GCGTGCGCAA CGCGCGCGGC GAGATGGTGC CGCTCGCGGC GTTCACGACA
CTGCACTGGA CGCTCGGGCC GCCGCAGCTC ACGCGCTACA ACGGCTATCC GTCGTTCACG
ATCAACGGCT CGGCCGCGGC CGGCCACAGC AGCGGCGAGG CGATGAGCGC GATCGAGCGG
ATCGCCGCGA CGCTGCCGGC CGGCATCGGC TATGCGTGGT CGGGGCAGTC GTTCGAGGAG
CGGCTGTCGG GCGCGCAGGC GCCGATGCTG TTCGCGCTGT CGGTGCTCGT CGTGTTCCTC
GCGCTCGCGG CGCTCTACGA GAGCTGGTCG ATTCCGTTCG CGGTGATGCT GGTCGTCCCG
CTCGGCGTGA TCGGCGCGGT GCTCGGCGTG ACGCTGCGCG CGATGCCGAA CGACATCTAT
TTCAAGGTGG GGCTGATCGC GACGATCGGG CTGTCCGCGA AGAACGCGAT CCTGATCGTC
GAGGTCGCGA AGGATCTCGT CGCGCAGCGC ATGTCGCTCG TCGACGCGGC GCTCGAGGCC
GCGCGCCTGC GGCTGCGGCC GATCGTGATG ACGTCGCTCG CGTTCGGCGT CGGCGTGCTG
CCGCTCGCGT TCGCGTCGGG CGCCGCGTCC GGCGCGCAGA TGGCGATCGG CACCGGCGTG
CTCGGCGGCG TGATCACGGC GACCGTGCTC GCGGTGTTTC TCGTCCCGCT GTTTTTCGTG
ATCGTCGGCC GCCTGTTCGA CGTCGGCCCG CGCCGGCGCG GCGGGGCGCA GCCGACGACG
ATGGAGGGTT CGCAACCATG A
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| Protein sequence | MARFFIDRPI FAWVIAIFIM LGGLFAIRAL PVAQYPDIAP PVVSIYATYP GASAQVVEES
VTALIEREMN GAPGLLYTSA TSSAGAASLY LTFKQGVNAD LAAVEVQNRL KTVDARLPEP
VRRDGIQVEK AADNIQLVVS LTSDDGRMTD VQLGEYASAN VVQALRRVEG VGKVQFWGAE
YAMRIWPDPV KLAGHGLTAS DIASAVRAHN ARVTIGDIGR SAVPDSAPIA ATVFADAPLK
TPADFGAIAL RAQPDGSALF LRDVARIEFG GNDYNYPSYV NGKVATGMGI KLAPGSNAVS
TEKRVRATMD DLSRYFPPGV KYQIPYETSS FVRVSMNKVV TTLIEAGVLV FLVMFLFMQN
LRATLIPTLV VPVALAGTFG VMYAAGFSIN VLTMFGMVLA IGILVDDAIV VVENVERLMV
EEGLAPYDAT VKAMRQISGA IVGITVVLTS VFVPMAFFGG AVGNIYRQFA LSLAVSIGFS
AFLALSLTPA LCATLLKPVS GDHHEKRGFF GGFNRFVARA TQRYATRVGT MLKKPVRWLV
VYGALTAAAA LMLTQLPTAF LPDEDQGNFM VMVIRPQGTP LAETMQSVRA VESAIRRDEP
TAYTYALGGF NLYGEGPNGG MIFVTLKNWK ERKAERDHVQ SIVARINERF AGTPNTTVFA
MNSPALPDLG SSSGFDFRLQ NRGGLDYATF SAAREQLLAA GGKDRALTDL MFAGTQDAPQ
LKLDIDRAKA SALGVSMDEI NTTLAVMFGS DYIGDFMHGT QVRRVMVQAD GRHRLDPDDV
KKLRVRNARG EMVPLAAFTT LHWTLGPPQL TRYNGYPSFT INGSAAAGHS SGEAMSAIER
IAATLPAGIG YAWSGQSFEE RLSGAQAPML FALSVLVVFL ALAALYESWS IPFAVMLVVP
LGVIGAVLGV TLRAMPNDIY FKVGLIATIG LSAKNAILIV EVAKDLVAQR MSLVDAALEA
ARLRLRPIVM TSLAFGVGVL PLAFASGAAS GAQMAIGTGV LGGVITATVL AVFLVPLFFV
IVGRLFDVGP RRRGGAQPTT MEGSQP
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