Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1572 |
Symbol | |
ID | 6123248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1734473 |
End bp | 1735306 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641638153 |
Product | ABC transporter |
Protein accession | YP_001764867 |
Protein GI | 170732920 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTTC GCAACTATTC CGCCACCACG CCGTCGGCGC CGCTGCGCGA GTCGCGCTTC GCGATCGCGA TGCCGGCGAA CGCAAGCAAC TGGATCGCCG TCTGGCGGCG CAACTATCTC GTGTGGCGCA AGCTCGCGCT CGCATCGATG TTCGGCAATC TCGCCGATCC GATGATCTAT CTGTTCGGGC TGGGTTTCGG GCTCGGGCTG ATGCTCGGCC ATGTCGACGG CGTGTCGTAT ATCGCGTTCC TCGCGGCCGG CACGGTCGGC TCGAGCGTGA TGATGTCCGC GAGCTTCGAG TCGATGTATT CGGGTTTCTC GCGGATGCAC GTACAGCGCA CGTGGGAAGC GATCATGCAT ACGCCGCTCG CGCTCGGCGA CATCGTGCTT GGCGAGATCG TGTGGGCGGC CAGCAAGGCG CTGCTGTCGG GCGGCGCGAT CATGCTCGTC GCGGGCGGCC TCGGCTACGC GCGGTTTCCG TCGATGCTCG CCGCGCTGCC CGTGATCGCG CTGGCCGGCC TCGCGTTCGC CAGCATCGCG ATGATCGTCA CGGCGCTCGC GCCGTCCTAC GACTTCTTCA TGTTTTATCA GACGCTCGTG CTGACGCCGA TGCTGCTGCT GTCGGGCGTG TTCTTCCCGA TCACGCAGTT GCCGCCGCTT GCGCAGCGCG CGGCGCAGGC GCTGCCGCTC GCGAATGCGG TCGAACTGAT CCGGCCCGCG ATGCTCGGGC GGCCGGCGAC CGACATCGCG CTGCACGTCG CGGTGCTCGC CGGCTACGCG GTCGGCGGAT TCCTGCTGTC CGCGTGGCTG TTCCGGCGGC GGATGATGCG CTGA
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Protein sequence | MDVRNYSATT PSAPLRESRF AIAMPANASN WIAVWRRNYL VWRKLALASM FGNLADPMIY LFGLGFGLGL MLGHVDGVSY IAFLAAGTVG SSVMMSASFE SMYSGFSRMH VQRTWEAIMH TPLALGDIVL GEIVWAASKA LLSGGAIMLV AGGLGYARFP SMLAALPVIA LAGLAFASIA MIVTALAPSY DFFMFYQTLV LTPMLLLSGV FFPITQLPPL AQRAAQALPL ANAVELIRPA MLGRPATDIA LHVAVLAGYA VGGFLLSAWL FRRRMMR
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