| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1522 |
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| Symbol | |
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| ID | 6124895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1689837 |
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| End bp | 1692320 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641638103 |
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| Product | ribonuclease R |
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| Protein accession | YP_001764819 |
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| Protein GI | 170732872 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.351431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0857248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCAAAT ATCCGTACCC CATTCCGAGC CGTGAAGAGA TTCTCGGCGT GCTGCGTACG
AGCGACGCGC CGCTGGCCGC CAACGACATC GCCGAAGCCC TGTCGATCAA GCGTCAAGAG
CGCGAGGGGT TCTTCCGGCG TGTCGCCGCG ATGGAGCGCG ACGGCCAGAT CCGCCTCGAC
AAGCGTGGCC ACTACCAGTT GACCCATCCG TCGAATTTCG TCGCCGGTCG CGTGCAGGGG
CATCGCGACG GCTACGGGTT CGTGATTCGC GACGACGGCC AGGACGACCT GTTCTTGCCG
AACGGCGAAA TGCAGAAAGT GATGCACAAC GACCGCGTGC TCGCGCGGAT CGTCGGCTAC
GATCGCCGCG GCCGGCCGGA AGGGCACGTC GTCGAAGTCA CCGAACGCGC GAACAAGCGC
GTGATCGGTC GCCTGCTGAA CGAGAACGGT GCGCTGATCG TCGCGCCGGA AGACAAGCGC
ATCGGCCACG ACATCCTGAT CACGCAGAAC GTGAAGAAGG CGAAGGTCGG GCAGGTCGTC
GTCGTCGAAC TGACCGATTT CCCGAGCCGT CATTCGCAGC CGCTCGGCCG TGTCGTCGAA
GTGCTCGGCG ATATCGACGA TCCGGGCATG GAAATCGAAA TCGCGGTGCG CAAGTACGGC
GTGCCGCATG AATTCAGCCA GCCGGCGCTC GACGAAGCCG CGGCGCTGCC CGACAAGGTG
CGCCCGGCCG ACCTGCGTTT CCGCGTCGAC CTGCGCGACG TGCCGCTCGT GACGATCGAC
GGCGAGGACG CCCGCGACTT CGACGATGCC GTCTACTGCG AGCCGGTCAA GGTCGGCCGC
GGCGACGGCT TCCGGTTGAT CGTCGCGATC GCCGACGTGT CGCACTACGT ACAGCCGGGT
AGCGGGCTCG ACGCCGACGC GCTCGAGCGC AGCACGTCGG TCTACTTCCC GCGTCGCGTG
ATTCCGATGC TGCCGGAGAA GCTGTCGAAC GGCCTCTGTT CGCTGAATCC GCAGGTCGAT
CGCTGCGTGC TCGCGTGCGA CATGGTGATC ACCGCGCGCG GCGAGATCAA GGCCTACCAG
TTCTACCCGG CCGTGATCCA TTCGGCGGCG CGCCTCACGT ACACCGAAGT CGCGGCCGTG
CTGTCGAACA CGAAGGGGCC GGAGGCCGCG CGCCGCGCCG ATCTGCTGCC GCACCTGCAG
GATCTGTACG GCGTCTACAA ATCGCTGTTC GCCGCCCGTC AAAAGCGCGG TGCGATCGAC
TTCGACACGA CCGAGACCTA CATCGTCTGC AACTCGCAGG GCAAGATCGA GCAGATCGTG
CCGCGCCAGC GCAACGACGC GCACAAGCTG ATCGAGGAAT GCATGCTGGC CGCGAACGTC
TGCGCGGCCG ATTTCCTGAA GCGCAACAAG CATCCGGGCC TGTACCGCGT GCACGCGGGG
CCGACGCCGG AGAAGCTCGA GAACCTGCGC GCATTCCTGC GCGGCATGGG CCTGTCGCTC
GGCGGCGGCG ACAAGCCGCA TGCGAGCGAC TACGCGGCGC TGATGGCGCA GATCCGCGAC
CGGCCGGATG CGCAGATGCT GCAGCCGATG CTGCTGCGCT CGATGCAGCA GGCCGTCTAC
AGCCCGGACA ACATCGGTCA CTTCGGCCTC GCGTACGAGG CGTACGCGCA TTTCACGAGC
CCGATCCGCC GCTATCCGGA CCTGCTCACG CACCGTGCGA TCTACGCGAT CCTGTCGGGC
AAGAAGTACA CGCCGAAGGC GCCGGAAGGC TTCGAGCTGA ATACCGCGCT GTCGCCGCGC
GCCCGCGCGA TGCAGCAGGC CGACGACGAA GCGCGCAACC GCTCGCGCTC GAACACGGCC
ATCTGGGAAG AGCTGGGCTT GCACTGCTCG GCGAACGAGC GCCGTGCGGA CGAGGCGTCG
CGAGACGTCG AAGCGTGGCT CAAGTGCTAC TTCATGCGCG ACAAGCTCGG CGAGGAGTAC
GGCGGGATGG TGAACGGCGT GACGTCGTTC GGCATCTTCG TGCAACTCGA CACGCTGTTC
ATCGAAGGGC TCGTGCACGT GACGGAACTC GGCTCGGACT ACTTCCAGTA CGACGAGATC
AAGAACGAGT TGCGCGGCGA ACGCACGGGC ATCCGCTATC GCCTGTCGGA TCGCGTGCGC
GTGCAGGTGA GCCGCGTCGA TCTCGATGCG CGCAAGATCG ATTTCCGCCT CGTGCGCGAT
ACGCCGGTGA AGGCGCCGCG TCCGTCGCCC GCGCCGGCTG CCGGCATCGA TCGCAACGGC
AACGGCAATG GCCCGCGCGT GCGTGCGCTG CCGCCGGCGG AGGAAACCGT GCCGCGTCGC
AAGAAGGCCG CGAGCGCGCC GAGCGTCGCG GTGCAGGAAG CGCGTGCCGC GCGTGGCGCC
GCGAAGAAGA AGAGCGGCGG TGCCGGCGGT GGCGCACCCG CGAAGCCGAC TGCGAAGAAG
GCTCGCGCCC GCAAGAAGTA TTGA
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| Protein sequence | MSKYPYPIPS REEILGVLRT SDAPLAANDI AEALSIKRQE REGFFRRVAA MERDGQIRLD
KRGHYQLTHP SNFVAGRVQG HRDGYGFVIR DDGQDDLFLP NGEMQKVMHN DRVLARIVGY
DRRGRPEGHV VEVTERANKR VIGRLLNENG ALIVAPEDKR IGHDILITQN VKKAKVGQVV
VVELTDFPSR HSQPLGRVVE VLGDIDDPGM EIEIAVRKYG VPHEFSQPAL DEAAALPDKV
RPADLRFRVD LRDVPLVTID GEDARDFDDA VYCEPVKVGR GDGFRLIVAI ADVSHYVQPG
SGLDADALER STSVYFPRRV IPMLPEKLSN GLCSLNPQVD RCVLACDMVI TARGEIKAYQ
FYPAVIHSAA RLTYTEVAAV LSNTKGPEAA RRADLLPHLQ DLYGVYKSLF AARQKRGAID
FDTTETYIVC NSQGKIEQIV PRQRNDAHKL IEECMLAANV CAADFLKRNK HPGLYRVHAG
PTPEKLENLR AFLRGMGLSL GGGDKPHASD YAALMAQIRD RPDAQMLQPM LLRSMQQAVY
SPDNIGHFGL AYEAYAHFTS PIRRYPDLLT HRAIYAILSG KKYTPKAPEG FELNTALSPR
ARAMQQADDE ARNRSRSNTA IWEELGLHCS ANERRADEAS RDVEAWLKCY FMRDKLGEEY
GGMVNGVTSF GIFVQLDTLF IEGLVHVTEL GSDYFQYDEI KNELRGERTG IRYRLSDRVR
VQVSRVDLDA RKIDFRLVRD TPVKAPRPSP APAAGIDRNG NGNGPRVRAL PPAEETVPRR
KKAASAPSVA VQEARAARGA AKKKSGGAGG GAPAKPTAKK ARARKKY
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