| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1502 |
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| Symbol | |
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| ID | 6123180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1666459 |
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| End bp | 1667286 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641638080 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001764799 |
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| Protein GI | 170732852 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000236519 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCGAT TGGGTTGGGT TCGCACGATC GCAGGCGCGA CGGCGTGCGC GTTGCTCGCC
AGCGGGTGCG CGATGTTCAA GGAGTCCGGA TACGGTATCG GTGCGCAGGC CGAACGCGGC
GCGCTGATGC AGGCCGCGGC CGACAAGAAT GCGGCGCCCG ATACGCCGGG CATGTATCTG
GGCCTGATCG AGCGGATGCA GGGGCAGGGG CTGTATTTCG CGTCGCTCGC GCACATCGAT
CAGTACGAGA AGCAATATGG CGCATCGCCG GACACGATCC TGCTGCGCGC CGATGCGTTG
CGGGCGACCG GCCAGTACGA TGCCGGCGTG GCCGCTTATA CCAAGTTGCT GACGACGCCG
CTCGCGGCGC GCGGCTATCG CGGGCTCGGG CTGACCGCCG GCGCCCGCGG CGATTTCGCA
CTGGCCGCGC AGCAGCTCGA GCAGGCGACG GCGCTTGCGC CGACCGATGC GGCGACGTTG
TCCGACCTTG CGTATTCGAA GATGCGCGAA GGCGATCTGG CGGGGGCACG CGTGCCGCTG
CTGAAGGCGG CCGAACTCGA GCAGAAGAAC CCGAAGATTC TCAGCAACTT CGTGCTCTAC
CTGCTCGCGA CCGGTCACGC GAAGGACGCG CGGCGGTTGA TGGATCAACA GAAGTTGTCG
CCCGCCGTGC GCAGCCAGAT TCGCGACGAC GAGACGAAGG TTGCGGCCGC GATGCGCGCG
AAGCAGCGCG CCGTCGCCTA TACGCCGGCC ACTGCGCCCG TGCCGTCGGT GGCCAGCAGC
GACAATTTCG ATCTTGCCGT GCCGCTGCTG CAGCGTTTCG CGCGATAA
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| Protein sequence | MNRLGWVRTI AGATACALLA SGCAMFKESG YGIGAQAERG ALMQAAADKN AAPDTPGMYL
GLIERMQGQG LYFASLAHID QYEKQYGASP DTILLRADAL RATGQYDAGV AAYTKLLTTP
LAARGYRGLG LTAGARGDFA LAAQQLEQAT ALAPTDAATL SDLAYSKMRE GDLAGARVPL
LKAAELEQKN PKILSNFVLY LLATGHAKDA RRLMDQQKLS PAVRSQIRDD ETKVAAAMRA
KQRAVAYTPA TAPVPSVASS DNFDLAVPLL QRFAR
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