Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1496 |
Symbol | |
ID | 6123174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1659524 |
End bp | 1660429 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641638074 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_001764793 |
Protein GI | 170732846 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000496809 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000663837 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCCAACA ACCTGACGAA GATCATTGCA GGCTTGCTGA TCGCGATCGC GATCCTGCTC GGCGTCTATG CGTGGATGCT CGGTCGCAAG CCGGCCGACG TCGCGCCGGT TGCCGCGACG GTCGCGACGC AGAGCGTGCC GGTCGTCGTG ACGACGCGGC CGTTGCAAGC CGGCCAGCCG ATTCCGGCCG AGGCGCTGAA GGTGCAGCAG TCGACCGCCG CGCCGCAGGG CGCGTTCGCC GATCCGCTGC AACTGGTTGG CCGCATTCCG GCAGCCGATA TTCCCGCGCA GGCGGCCGTC GTCGCGAGCG CATTGTCGTC CGGCCTCGCC GAGCAGCTCG CACCGGGAGA GCGTGCCGTC GCGATCAAGG TCGACGAGAC CAATGCGGTC GGCAACCGCG TGCGGCCCGG CAACTATGTC GACGTGTTCC TGAACCTGAA GCGCGACGGG ACCGGCGTGG CGATCGGCGG GACGTCGACG GCGGAGATCG TGAATACCCA GGCGCGGCTG CTGATGTCGA AAGTCCGCGT GCTGTCGTTC GGCGATGCGA CGACCGAGCG CGACAGCTCG AACGGCTCGG TGGTCGGGAC GCGGACCGCG GTGCTGGCGG TGCCGACCGC GCAGGTGGAC GCGCTGACGC TCGCCGAGCA GAGCGGCCGG CTCGTGCTCG CGCTGCGTAG CCCACGCGAC GAAGATGTCG CGACGCAAAC CGTCGCGGTC CGTGTCGGCG ACGACAAGAG CCCGTCGGCG CTTGCCGCGG CGGGCGTGGT GCTGGGCGAG TTGTCGAAGA GCGCGACGAC GGCGGCACCG GCCCCGCGTG CGGCGCCGCG GGTGGTCGCG CGGCATCCGA GCGGCGGCAG CATCGAAGTG ATTCGGGGTG GGCGGACCGA AACGGTCGCT TATTGA
|
Protein sequence | MANNLTKIIA GLLIAIAILL GVYAWMLGRK PADVAPVAAT VATQSVPVVV TTRPLQAGQP IPAEALKVQQ STAAPQGAFA DPLQLVGRIP AADIPAQAAV VASALSSGLA EQLAPGERAV AIKVDETNAV GNRVRPGNYV DVFLNLKRDG TGVAIGGTST AEIVNTQARL LMSKVRVLSF GDATTERDSS NGSVVGTRTA VLAVPTAQVD ALTLAEQSGR LVLALRSPRD EDVATQTVAV RVGDDKSPSA LAAAGVVLGE LSKSATTAAP APRAAPRVVA RHPSGGSIEV IRGGRTETVA Y
|
| |