Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1480 |
Symbol | |
ID | 6123158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1638421 |
End bp | 1639635 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641638058 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001764777 |
Protein GI | 170732830 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC AACAAAACGC CGCCAGCGCG CAGCCGCAGA ACAACGGCAA GCGCAAACGA ATGATGACGC TGCTCGTCGC GGTCATCGTG ATCGCGGCCA TCGCATACGG CCTGTACTAC TTCCTCGTCG CCCGCTTCCA TGAAGATACC GACGATGCCT ACGTGAACGG CAACGTCGTG CAGATCACGC CGCAGGTCAC CGGCACCGTG ATCGCCGTGA AGGCGGACGA CACGCAAACG GTCAAGGCCG GCGATCCGCT CGTCGTGCTC GACCCCGCCG ATTCGCAGGT CGCGCTGCAG CAGGCGGAAG CCAACCTCGC GCAGACGGTG CGCCAGGTGC GCGGCCTGTT CGTCAACGAC GACCAGTACC GCGCGCAAGT CGCGCTGCGC CAGTCCGACC TGTCGAAGGC CCAGGACGAT CTGCGCCGCC GCCTGGCCGT CGCGCAGACG GGCGCCGTGT CGCAGGAAGA AATCTCGCAC GCCCGCGACG CGGTGAAGGC CGCGCAGGCA TCGGTCGACG CCGCGCAGCA ACAGCTCGCA TCGAATCGCG CATTGACCGC GAACACGACG ATCGCATCGC ACCCGAACGT GATGGCCGCC GCCGCGAAGG TACGCGACGC GTACCTCGCG AACGCGCGTA ACGTGCTGCC GGCGCCGGTC ACCGGCTACG TCGCGAAGCG CTCGGTGCAG GTCGGCCAGC GCGTGTCGCC CGGCAACCCG CTGATGTCGG TGGTGCCGCT CAATGCCGTG TGGGTCGACG CGAACTTCAA GGAAGTCCAG CTGAAGCACA TGCGCATCGG CCAGCCGGTC GAGCTGACGG CCGACATCTA TGGTTCGTCG GTCACGTACC ACGGCAAGGT CGTCGGCTTC TCGGCCGGCA CGGGCTCGGC GTTCTCGCTG CTGCCGGCGC AGAATGCGAC CGGCAACTGG ATCAAAGTCG TGCAGCGCCT GCCGGTGCGG ATCGAGCTCG ATCCGAAGGA TCTCGACAAG CATCCGCTGC GTATCGGCCT GTCGATGCAG GTCGACGTGG ACATCAAGGA CGAACGCGGC GACCAGCTCG TCAACGCGCC GAACACCGTC TACGAGACCA ACGTGTTCGC GAAATACGGC GACGAGGCCG ACGCCGAAAT CGCGCGCATC ATCGCCGAGA ACGCGGGCGG CAACGCATCG GCGCCGGTCG CGGCGAAGCA GAACACCGCC GCGAAAATGA TGTAA
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Protein sequence | MSDQQNAASA QPQNNGKRKR MMTLLVAVIV IAAIAYGLYY FLVARFHEDT DDAYVNGNVV QITPQVTGTV IAVKADDTQT VKAGDPLVVL DPADSQVALQ QAEANLAQTV RQVRGLFVND DQYRAQVALR QSDLSKAQDD LRRRLAVAQT GAVSQEEISH ARDAVKAAQA SVDAAQQQLA SNRALTANTT IASHPNVMAA AAKVRDAYLA NARNVLPAPV TGYVAKRSVQ VGQRVSPGNP LMSVVPLNAV WVDANFKEVQ LKHMRIGQPV ELTADIYGSS VTYHGKVVGF SAGTGSAFSL LPAQNATGNW IKVVQRLPVR IELDPKDLDK HPLRIGLSMQ VDVDIKDERG DQLVNAPNTV YETNVFAKYG DEADAEIARI IAENAGGNAS APVAAKQNTA AKMM
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