Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1422 |
Symbol | |
ID | 6123100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1575347 |
End bp | 1576585 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641637998 |
Product | major facilitator transporter |
Protein accession | YP_001764719 |
Protein GI | 170732772 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCA GCCTCGACTC CGGAGCCGCC GGCGCAGCCG CCGCCCACCC GTCCGCACCG CCCGCCGCCC GCACCGTCTA CCCGGTGCTC GGCGCGATCA GCTTCTCGCA CATGCTCAAC GACATGATCC AGTCGTTGAT CCTCGCGATC TACCCGATGC TCAAGAGCCA GTTCGCGCTG TCGTTCGCGC AGATCGGCCT GATCACGCTC ACTTACCAGA TCACCGCGTC GCTGCTGCAG CCGCTCGTGG GCCTCTATAC CGACAAGCAT CCGAAGCCGT ATTCACTGCC GGTCGGCATG GGCTTCACGC TCGCGGGGCT GCTGCTGATG TCGGCCGCGC CGAATTTCCC GATGCTGCTG GTGGCCGCCG CGCTCGTCGG CTGCGGCTCG TCGGTGTTCC ACCCCGAATC GTCGCGGGTC GCGCGGATGG CGTCGGGCGG CCGGCACGGG CTCGCGCAGT CGGTGTTCCA GGTGGGCGGC AATGCAGGCT CGGCGCTCGG GCCACTGCTC GCCGCGCTCG TGATCATTCC GCACGGCCAG CACAGCATCG CGTGGTTCTC GGCGGCCGCG CTCGTCGCGA TGATCGTGCT CACGCAGATC GGCCACTGGT ACAAGAAGCA TCCGTCGATG AAGAAAAAGG CCGCCTCGGC CGGCCACCCG ACGCTGTCGC GCGGCCGCGT GATGGCCGCG ATCGGCGTGC TGGTGCTGCT CGTGTTCTCG AAGTACTTCT ACCTCGCGAG CATCAACAGC TATTTCACGT TCTACCTGAT CGACAAGTTC CACCTGTCGG TGCAGGCCGC GCAGATCCAC CTGTTCGTGT TCCTCGCGGC GGTGGCTGCC GGCACGCTGA TCGGCGGGCC CGTCGGCGAC CGGATCGGCC GCAAGTACGT GATCTGGGTG TCGATCCTGG GCGTCGCGCC GTTCACGATG CTGCTGCCGT ACGCGAACCT GTTCTGGACG AGCGTGCTGA CCGTGATCAT CGGCGTCGTG CTGGCGTCGG CGTTCGCCGC GATCCTCGTC TATGCGACGG AGCTGATGCC CGGCAAGGTC GGGATGGTCG CGGGCCTGTT CTTCGGCTTC GCGTTCGGCC TGGGCGGCGT CGGCGCGGCC GTGCTCGGTC AGCTCGCCGA TGCGACGAGC ATCCCGTTCG TCTACAAGGT GTGCTCGTTC CTGCCGCTGA TCGGCGTGCT GACGGTGTTC CTGCCGAACC TCGAAAGCAG CCGGCGCAAG CAGGCGTGA
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Protein sequence | METSLDSGAA GAAAAHPSAP PAARTVYPVL GAISFSHMLN DMIQSLILAI YPMLKSQFAL SFAQIGLITL TYQITASLLQ PLVGLYTDKH PKPYSLPVGM GFTLAGLLLM SAAPNFPMLL VAAALVGCGS SVFHPESSRV ARMASGGRHG LAQSVFQVGG NAGSALGPLL AALVIIPHGQ HSIAWFSAAA LVAMIVLTQI GHWYKKHPSM KKKAASAGHP TLSRGRVMAA IGVLVLLVFS KYFYLASINS YFTFYLIDKF HLSVQAAQIH LFVFLAAVAA GTLIGGPVGD RIGRKYVIWV SILGVAPFTM LLPYANLFWT SVLTVIIGVV LASAFAAILV YATELMPGKV GMVAGLFFGF AFGLGGVGAA VLGQLADATS IPFVYKVCSF LPLIGVLTVF LPNLESSRRK QA
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