Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1420 |
Symbol | |
ID | 6123098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1572117 |
End bp | 1574480 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641637996 |
Product | UvrD/REP helicase |
Protein accession | YP_001764717 |
Protein GI | 170732770 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01075] DNA helicase II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0732039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGATC TGCTCGCCAA TCTGAACCCC GAACAACTCG CCGCCGTCAC GTTGCCGAAC GAACCGGCGC TGATCCTCGC AGGGGCGGGC AGCGGCAAGA CCCGCGTACT GATCACGCGC ATCGCGTGGC TGATCCAGCA GGGCTATGCG TCGCCGCCCA CCGTGCTCGC CGTCACCTTC ACGAACAAGG CCGCGCGCGA GATGATGGCG CGCCTGTCGG CGATGATGCC GATCGACACG CGCGGAATGT GGATCGGCAC GTTCCACGGC CTGTGCAACC GGATGCTGCG CACGCACTGG CGCGACGCCG GCCTGCCGCA GACTTTCCAG ATCCTCGACA CGGCCGACCA GTTGTCCGCG ATCAAGCGAC TGATGAAGGC GGCGAACGTC GACGACGAAA AGTATCCGCC GAAGAACGTC CAGTACTTCA TCAACAACGC GAAGGAGCAG GGGCTGCGCC CGGACAAGGT CGACGCGACC GACAACTTCA ACCGCAAGTT CGTCGAGCTG TACCAGGCGT ACGACCAGCA GTGCCAGCGC GAAGGCGTCG TCGATTTTCC CGAGCTGCTG CTGCGCTGCT ACGAGCTGCT CGCGTACAAC GCGCCGTTGC GTGCGCACTA CCAGGCGCGC TTCCGGCACA TCCTCGTCGA CGAGTTCCAG GACACCAACA AGCTGCAGTA CGCGTGGCTC AAGATGCTCG CGGGCGGTGA GAACGCGATT TTCGCGGTCG GCGACGACGA TCAGTCGATC TATGCGTTCC GCGGCGCGAA CGTCGGCAAC ATGCGCGACT TCGAAGACGA ATTCCGCGTG CGCAACCTGA TCAAGCTCGA GCAGAACTAC CGTTCGCACG GCAACATCCT CGACGCGGCG AACCAGTTGA TCTCGAACAA CGCGCACCGC CTCGGCAAAA ACTTGCGTAC CGATGCCGGC CACGGCGAAC CGGTGCGCGT GTACGAAGCC AGCACCGATT CGCAGGAAGC CGGCTGGATC GTCGAGGAGA TCCGCTCGCT GATCAATACC GGGATGGCGC GCAGCGAAGT GGCCGTCCTG TACCGCAGCA ACGCGCAGTC GCGCTCGATC GAGCACACGC TGATGTCGTC GGGCATTCCG TACCGCGTGT ACGGCGGCCT GCGCTTTTTC GAGCGGCAGG AAGTGAAGCA CGCGCTCGCA TACCTGCGCC TGATCGACAA CCCGAACGAC GACACGGCAT TCGCGCGCGT CGTGAATTTC CCGACCCGCG GCATCGGCGC GCGCTCGGTC GAGCAGTTGG CCGACGCCGC GCGCCTGTAC GGCTGCTCGA TGGCCGCCGC GATTCCGTAC GTGACCGGCA AGGCCGGCAC GAGCCTCGGC GGGTTCGCGA ACCTGATCGC GAAGATGCGT GCCGACACGC AGCACATGAA CCTGCCCGAC ACCGTCGAGC ACATCGTGCG CGCGAGCGGC CTTGCCGATT TCTACCAGGG CGAGCGCGAA GGCCAGGATC GCCTCGAAAA CCTGCAGGAA CTCGTGAACG CGGCCACCGC GTTCATCGCC GAGGAAGGCT ACGGGCTCGA CACGCCGGCC CGCTCGATCC CGCTGCGCGC GGGCGCGATC GCGGCGCCCG AGCTCGGTAC CGCGACGGAC GATCCGGCGG TCGACGTGCT CGACCCCGCA TCGCCTGCCG ATCCCGCGCA GAACCCCGAC ACGATGACGC CGCTCGCCGG CTTCCTGTCG CACGCGTCGC TGGAGGCCGG CGACAACCAG GCGCAGGCCG GCCAGGACGC GGTGCAGCTG ATGACCGTGC ACGCGGCGAA GGGGCTCGAA TTCGCGGCCG TGTTCATCAC GGGGCTCGAG GAGGGCCTCT TCCCGCACGA GAACAGCGTG CTCGAATCGG ACGGCCTCGA GGAAGAGCGC CGGCTGATGT ACGTCGCGAT CACGCGCGCG AAGGAGCGGC TCTATCTGTC GTTCGCGCAG AGCCGGATGC TGCATGGCCA GACGCGCTAC AACGTGCGCT CGCGCTTCTT CGACGAACTG CCCGAGCACG TGCTGAAGTG GCTGACGCCG AAGGTCGAGG CCGGGTCGCG CTGGGGCGGG CGCTCGGACA ATGCCGGCTA CGGGCGCGAC TGGTTCGCGC GGCCGGGCGG CGGCAGTCGC GAGCAGATCG TCGATGCGGC CGTGTCCGCG CCGCTGCCCG CGTTCGCGGA CAAGCAGCGC GCGGCCGACG CCGGCTTCCG GGTCGGCCAG CAGGTATTCC ATACGAAGTT CGGCGAAGGC ACGGTCACCG CGCTCGAAGG CAACGGCACC GATGCGAAGG CGCAGGTGAA GTTCAAGCGC CACGGCGAGA AATGGCTCGC GCTTGCGGTC GCGAAATTGC AGGCGGTGGA ATGA
|
Protein sequence | MPDLLANLNP EQLAAVTLPN EPALILAGAG SGKTRVLITR IAWLIQQGYA SPPTVLAVTF TNKAAREMMA RLSAMMPIDT RGMWIGTFHG LCNRMLRTHW RDAGLPQTFQ ILDTADQLSA IKRLMKAANV DDEKYPPKNV QYFINNAKEQ GLRPDKVDAT DNFNRKFVEL YQAYDQQCQR EGVVDFPELL LRCYELLAYN APLRAHYQAR FRHILVDEFQ DTNKLQYAWL KMLAGGENAI FAVGDDDQSI YAFRGANVGN MRDFEDEFRV RNLIKLEQNY RSHGNILDAA NQLISNNAHR LGKNLRTDAG HGEPVRVYEA STDSQEAGWI VEEIRSLINT GMARSEVAVL YRSNAQSRSI EHTLMSSGIP YRVYGGLRFF ERQEVKHALA YLRLIDNPND DTAFARVVNF PTRGIGARSV EQLADAARLY GCSMAAAIPY VTGKAGTSLG GFANLIAKMR ADTQHMNLPD TVEHIVRASG LADFYQGERE GQDRLENLQE LVNAATAFIA EEGYGLDTPA RSIPLRAGAI AAPELGTATD DPAVDVLDPA SPADPAQNPD TMTPLAGFLS HASLEAGDNQ AQAGQDAVQL MTVHAAKGLE FAAVFITGLE EGLFPHENSV LESDGLEEER RLMYVAITRA KERLYLSFAQ SRMLHGQTRY NVRSRFFDEL PEHVLKWLTP KVEAGSRWGG RSDNAGYGRD WFARPGGGSR EQIVDAAVSA PLPAFADKQR AADAGFRVGQ QVFHTKFGEG TVTALEGNGT DAKAQVKFKR HGEKWLALAV AKLQAVE
|
| |