Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1407 |
Symbol | |
ID | 6123085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1555676 |
End bp | 1556602 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641637983 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001764704 |
Protein GI | 170732757 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.872133 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGA AGATAGGTTG CGCCCCGTGC TGCTGGGGCG TCGACGACGT GAAGAACCCG CACCTGCCGC CGTGGCGGCA TGTGCTTGCC GAGGCCGCCC AGGCCGGCTA CTCGGGCATC GAGCTCGGGC CGTACGGCTA CATCCCGCTC GAACTCGACG TGGTGAGCGC CGAGCTCGAA CGCCAGCGCC TGAGCATCAC GGCCGGCACG ATCTTCGACG ATCTCGTGTC GCCGGAGAAC CTGCCGAACC TGCTGCGCCA GACGCGCGAC ATCTGCGCGC TGATCACGCG GCTGCCGAAG CTGCCGACCC AGGACGGCCA GCGCTACGCG GCGCCGTACC TGGTCGTGAT CGACTGGGGC CACGAGGAGC GCGATTACGC GGCCGGCCAC GGCGATCGCG CGCCGCGGCT GTCCGACGCG CGCTGGGCGC GGATGGTCGA CCATATCCGG CAGATCGCGA CGATCGCGCG CGACGAGTTC GGCGTGCGCG CGGTGATCCA TCCGCATGCG GGCGGCTACA TCGAGTTCGC GGACGAGATC GACCGGATCG TCGCCGACAT TCCGGCCGAC ACGGCGGGCC TGTGTCTCGA TACCGGCCAC CTGCATTACT CGGGCATGGA CCCGGAAACG TGGTTGCGCC GCCATGCGGC ACGGCTCGAC TACGTGCATT TCAAGGATAT CGACGCAGCC GTGTACGACG CGGTGATGGG CGAGCACATC GCGTTCTTCG CGGCGTGCGC GCGCGGCGTG ATGTGCCCGA TCGGCACCGG CGTGCTCGAC TACCCGGCGA TCCGCCAGGC GCTCGTCGAC ATCGGCTACG CCGGCTACAT CACGATCGAG CAGGAGCGCG ACCCGCGCAA CGCCGGCACG AGCCTGCGCG ACGTCGCCGC GAGCCGCGCG TTTCTCGCGT CGGCCGGTTT TGCATGA
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Protein sequence | MTMKIGCAPC CWGVDDVKNP HLPPWRHVLA EAAQAGYSGI ELGPYGYIPL ELDVVSAELE RQRLSITAGT IFDDLVSPEN LPNLLRQTRD ICALITRLPK LPTQDGQRYA APYLVVIDWG HEERDYAAGH GDRAPRLSDA RWARMVDHIR QIATIARDEF GVRAVIHPHA GGYIEFADEI DRIVADIPAD TAGLCLDTGH LHYSGMDPET WLRRHAARLD YVHFKDIDAA VYDAVMGEHI AFFAACARGV MCPIGTGVLD YPAIRQALVD IGYAGYITIE QERDPRNAGT SLRDVAASRA FLASAGFA
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