| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1396 |
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| Symbol | |
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| ID | 6123074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1542498 |
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| End bp | 1543244 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641637972 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001764693 |
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| Protein GI | 170732746 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.872133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC TGACAGGCAA GGTCGCGATC GTCACGGGCG CATCCAAGGG CATCGGCGCG
GCAATCGCGA AGGCACTGGC CGACGAAGGC GCGGCGGTCG TCGTCAACTA CGCGAGCAGC
AAGGCGGGCG CGGATGCGGT CGTGAGCGCG ATCACCGAAG CGGGCGGCCG CGCGGTCGCG
GTCGGCGGCG ACGTGTCGAA GGCCGCCGAT GCGCAGCGCA TCGTCGATAC CGCGGTCGAA
ACGTACGGCC GTCTCGACGT GCTCGTCAAC AACTCCGGCG TGTACGAATT CGCACCGATC
GAAGCGATCA CCGAGGAACA CTACCGCCGG CAGTTCGACA CGAACGTGTT CGGCGTGCTG
CTGACCACGC AGGCGGCGGT CAAGCATCTC GGCGAAGGCG CGAGCATCAT CAACATCAGC
TCGGTCGTGA CCAGCATCAC GCCGCCGGCC AGCGCCGTGT ACAGCGGCAC GAAGGGTGCG
GTCGACGCGA TCACCGGCGT GCTCGCGCTC GAACTCGGCC CGCGCAAGAT CCGTGTGAAC
GCGATCAATC CGGGAATGGT CGTGACCGAA GGCACGCACA GCGCGGGCAT CATCGGTTCC
GATATGGACG CACAGGTGCG TAGCCAGACG CCGCTCGGCC GGCTCGGCGA GCCGAACGAC
ATCGCGTCGG TCGCCGTGTT CCTCGCGTCG GACGATGCGC GCTGGATGAC CGGCGAGCAC
CTCGTCGTGA GCGGCGGGTT GAACTGA
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| Protein sequence | MSKLTGKVAI VTGASKGIGA AIAKALADEG AAVVVNYASS KAGADAVVSA ITEAGGRAVA
VGGDVSKAAD AQRIVDTAVE TYGRLDVLVN NSGVYEFAPI EAITEEHYRR QFDTNVFGVL
LTTQAAVKHL GEGASIINIS SVVTSITPPA SAVYSGTKGA VDAITGVLAL ELGPRKIRVN
AINPGMVVTE GTHSAGIIGS DMDAQVRSQT PLGRLGEPND IASVAVFLAS DDARWMTGEH
LVVSGGLN
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