| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1379 |
|---|
| Symbol | |
|---|
| ID | 6123057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1523567 |
|---|
| End bp | 1525153 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641637955 |
|---|
| Product | acid phosphatase |
|---|
| Protein accession | YP_001764676 |
|---|
| Protein GI | 170732729 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3511] Phospholipase C |
|---|
| TIGRFAM ID | [TIGR03397] acid phosphatase, Burkholderia-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.589367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.451646 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC ACGCCTGGAT TCGCTACACG CCGATCGCCC TCGCGGCCGC GCTCAGCCTG
ACCGCCTGCG GCGGCGACGA CGTCACGCAA CAGGGCCTGT CGGCCGTCAA GAACGTCGTC
GTGATCTACG CGGAAAACCG CAGCTTCGAC AACCTGTACG GCAACTTCCC GGGCGCGAAC
GGTCTGCAGA ACGCGACGGC CGCGAATTCG GTGCAGAAGG ATCGCGACGG CTCGACGATG
GCGACGCTGC CGAAGATCTG GGGCGGCCTC ACCGCGACCG GCATCACGCC GGCGGTGACC
GAGGCGATGA CGGCGAACCT GCCGAACGCG CCGTTCGCGA TCGACGATCC GAAAGGCTTC
AACCAGTCGA TGAGCATCGC GACGCGCGAC ATCGTGCACC GCTTCTACCA GGACCAGATG
CAGATCAACG GCGGCAAGAA CGACATGTAC GCCGCCTGGA CCGACGCGGG CGGCCTGACG
ATGGGCCACT ACACGGCCGA TCCGTCGAAG CTGCCGCTGT GGAAGATCGC GCAGCAGTAC
GTGCTGGCCG ACAACTTCTT CATGGGCGCG TTCGGCGGTT CGTTCCTGAA CCACCAGTAC
CTGATCTGCG CGTGCGCGCC GTACTACGCG AATGCCGACA AGAGCCCGGC GGCCGGCAAG
ATCGCCGTGC TGAACGCCGA CGGCAAATCG CTGAAGGTCG CGACGAATTC GCCGGCGTCC
GCGCTGAGCG GCCCGCCGAA GTTCGTCAAC GACGGCGCGC TCACGCCCGA CTTCTACGGC
ATCAACACGA TGCAGCCGGC GTATCAGCCG AGCGGCAACA AGGCGGCCGC GGGCGGCGAT
CCGCTGCTCG CCGACCCGGC CAATCCGTCG ACGATGCCGC CGCAGACGGC GACCAACATC
GGCGACCTGA TGACCAACGC GGGCGTGTCG TGGGCGTGGT ATTCCGGCGC GTGGGGCCAG
GCGCTGCAGG CGAGCCAGAA CGGCACGTCG AACGTGATCT ACGGCGCCGA CCTGTCGACG
CCGAACTTCC AGCCGCACCA CCAGCCGTTC AACTACTTCG CGAACCAGGC GCCGGGCACC
GCGAGCCGCG CGCAGCACCT GCTCGACGGC GGCGCGAACG GCGCCGAGTT CATCAAGGCG
ATCGACGCGG GCACGCTGCC GCAGGTCACG TTCTACAAGC CGCAAGGCAA CCTGAACGAG
CACCCGGGTT ACACGGACGT CACGTCCGGC GACCAGCACA TCGCCGACGT GATCGCGCAC
CTGCAGGCGA GCCCGCAGTG GAAGAACATG GTCGTGGTCG TCACGTACGA CGAAAACGGC
GGCTTCTGGG ATCATGCGAC GCCGCCGAAT GCCGACCGCT GGGGCCCGGG TACCCGCATT
CCCGCGCTGA TCGTGTCGCC GTACGCGAAG AAGGGCTTCG TCGATCACAC GCAGTACGAC
ACGGGTTCGA TCCTGCGCTT CATCACGCGC CGCTTCTCGC TGCCGCGCCT CGCGGGCCTG
CAGCAGCGCG ACGACGCGCT GAAGGCGAAC GGCGCGCAGC CGATGGGCGA CCTGACGAAC
GCGCTCGCGC TGTCGCCGAA CCTGTAA
|
|---|
| Protein sequence | MKKHAWIRYT PIALAAALSL TACGGDDVTQ QGLSAVKNVV VIYAENRSFD NLYGNFPGAN
GLQNATAANS VQKDRDGSTM ATLPKIWGGL TATGITPAVT EAMTANLPNA PFAIDDPKGF
NQSMSIATRD IVHRFYQDQM QINGGKNDMY AAWTDAGGLT MGHYTADPSK LPLWKIAQQY
VLADNFFMGA FGGSFLNHQY LICACAPYYA NADKSPAAGK IAVLNADGKS LKVATNSPAS
ALSGPPKFVN DGALTPDFYG INTMQPAYQP SGNKAAAGGD PLLADPANPS TMPPQTATNI
GDLMTNAGVS WAWYSGAWGQ ALQASQNGTS NVIYGADLST PNFQPHHQPF NYFANQAPGT
ASRAQHLLDG GANGAEFIKA IDAGTLPQVT FYKPQGNLNE HPGYTDVTSG DQHIADVIAH
LQASPQWKNM VVVVTYDENG GFWDHATPPN ADRWGPGTRI PALIVSPYAK KGFVDHTQYD
TGSILRFITR RFSLPRLAGL QQRDDALKAN GAQPMGDLTN ALALSPNL
|
|---|
| |