Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1293 |
Symbol | |
ID | 6122971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1417545 |
End bp | 1418351 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641637868 |
Product | putative hemolysin-like protein |
Protein accession | YP_001764590 |
Protein GI | 170732643 |
COG category | [R] General function prediction only |
COG ID | [COG3176] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.418328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGAAC TGCCGACGCC TACGCTCCCT TTTGCCTCGC TGCCCCTCGA CACGTCGCGA CGCCACCTGC CGCGCGCCAG TGAAACCGTC ACATCGGAGT ATCGCCTGCG CGCCGCATGG GCGCGTACGG AAGACGAATT GCGCGAAGCC CAGCGCCTGC GCTACAGCGT GTTCGCCGAA GAGATGGGCG CGCAGGTCAG CGGCCCGTCC GGTCTCGATG TCGATCCGTT CGACGTGTAT TGCGACCACC TGCTGGTCCG CGATCTCGAC ACGCTGAAAG TCGTCGGTAC GTACCGCGTG CTGCCGCCGC ACCAGGCGGC GCGTGTCGGC CGCCTGTACG CCGAAGGCGA ATTCGATCTG TCGCGCCTCA CGCACCTGCG CGGCAAGATG GTCGAGGTCG GCCGCTCGTG CGTGCACAGC GACTACCGCA GCGGCGCCGT CATCATGGCG CTGTGGGGCG GCCTGGGCGC GTACATGATG CAGAACGGCT ACGAGACGAT GCTCGGCTGC GCGAGCGTGT CGATGGCCGA CGGCGGCCAC TACGCGGCGA ACCTGTACCA GTCGCTGTCG GCGGGCTCGC TGACGGCGCC CGAGTATCGC GCATTCCCGC ACACGGCCCT GCCGGTCGAT GAACTGCAGA CGGGCACCGT CGTCGCACCG CCGCCGCTGA TCAAGGGTTA CCTGCGTCTC GGCGCGAAGA TTTGCGGCGC CCCGGCCTGG GATCCCGATT TCAACTGCGC GGATTTCCTG ACGCTGTTCC GTCTGTCGGA CATCAACGCG CGCTACGCCC GCCACTTCCT GGGCTGA
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Protein sequence | MRELPTPTLP FASLPLDTSR RHLPRASETV TSEYRLRAAW ARTEDELREA QRLRYSVFAE EMGAQVSGPS GLDVDPFDVY CDHLLVRDLD TLKVVGTYRV LPPHQAARVG RLYAEGEFDL SRLTHLRGKM VEVGRSCVHS DYRSGAVIMA LWGGLGAYMM QNGYETMLGC ASVSMADGGH YAANLYQSLS AGSLTAPEYR AFPHTALPVD ELQTGTVVAP PPLIKGYLRL GAKICGAPAW DPDFNCADFL TLFRLSDINA RYARHFLG
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