| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1286 |
|---|
| Symbol | |
|---|
| ID | 6122964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1412330 |
|---|
| End bp | 1413484 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641637860 |
|---|
| Product | HK97 family phage portal protein |
|---|
| Protein accession | YP_001764583 |
|---|
| Protein GI | 170732636 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4695] Phage-related protein |
|---|
| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGA TCGATCGCAT GATGAACCGG CTCGGTTTCG AGCGTCGCAG CGACGGCGAC
AGCTACTGGC AAAACTTCGC CGCGCTGCGC GGCAACGGTA TTTCGCCGCA GCGTTCGGAA
AGCGTCAGCG CGGTATACGC GTGTGTCGCG GCAATTTCGG AAACGGTCGC AAGCCTGCCG
CTGATCCTGT ACCGGCGCAC CGACGACGAT GGCCGCGAGC GTGCATCCGA CCATCCGCTG
TATTCCGTGC TGCACGACAC GCCGAACGAG CAGCAGACCG CGCTCGAATT TCGCGAGCAA
ATGCAGGCGG CCGTGCTGCT GCGTGGCAAT GCGTATGCGC GAATTATTCA CGGGTGGGAC
GGCCAGGTGC GCCAGTTGTT GCCGATGCAC CCCGATCGCA CGACGGTGCT GCGCCTGCCG
TCCGGCCGGC TCGGCTACGA AACGACCGAC GGGGCCGGCC GCGTGATCCG CCTGAATCAA
GACGAGGTGC TGCATTTGCG CCACCGAACC GACGACGGCG TGCTCGGCGT GTCTCCGCTG
ACGCGAGCCC GCGAGGTGGT GCAACTGGCG ATCGCCGAGC GGGAGCACGG CAACAGCGCA
TTCAGCAACG GCACGCGGCT GTCCGGCATC CTGAAATTCC CGCAGAAGCT GAAGAAAGAG
CAGCGCGAGG GGCTGGCGTC GTCGTGGACC AGCCAGTATG CCGGCGGTGC CAATGCAGGC
AAGACGGCGA TTCTCGAAGA GGGCGTCGAC TACCAGACCA TCAGCATGAC GCTGGAGGAT
GCCGAGTGGA TCGCAGCGCG GCAATTCAGC GTCGAGGAAG TGTGCCGGCT GTTCCGCGTG
CCGCCGACGA TGGTGGGTGA TCTGCGCCAC GGCAATTACT CGAACAGCGT CGAGCTCGCC
CGCCAGTTCG TCACGATGAC ACTGCGCCGT TATCTGGTGA TGTGGGAGCA AGCCATTACC
CGGGCCTGCC TGACCACGCA GGGGGCGAAG AGCTACTTCG CCGAGCATAG CGTCGAGGGC
CTGCTGCGCG GCGATGCGAA GAACCGCGCT GACTTCTATC ACGAAGCGCT CGGCGACCAG
TGGATGACGG TCGATGAGGT GCGCAAGCTG GAAAACCTAC CGAAGCGCGC GGTGCCTGCC
CCGGCCGCGT CCTGA
|
|---|
| Protein sequence | MSLIDRMMNR LGFERRSDGD SYWQNFAALR GNGISPQRSE SVSAVYACVA AISETVASLP
LILYRRTDDD GRERASDHPL YSVLHDTPNE QQTALEFREQ MQAAVLLRGN AYARIIHGWD
GQVRQLLPMH PDRTTVLRLP SGRLGYETTD GAGRVIRLNQ DEVLHLRHRT DDGVLGVSPL
TRAREVVQLA IAEREHGNSA FSNGTRLSGI LKFPQKLKKE QREGLASSWT SQYAGGANAG
KTAILEEGVD YQTISMTLED AEWIAARQFS VEEVCRLFRV PPTMVGDLRH GNYSNSVELA
RQFVTMTLRR YLVMWEQAIT RACLTTQGAK SYFAEHSVEG LLRGDAKNRA DFYHEALGDQ
WMTVDEVRKL ENLPKRAVPA PAAS
|
|---|
| |