| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1255 |
|---|
| Symbol | |
|---|
| ID | 6122933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1375582 |
|---|
| End bp | 1376316 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641637829 |
|---|
| Product | DNA polymerase III subunit epsilon |
|---|
| Protein accession | YP_001764552 |
|---|
| Protein GI | 170732605 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0108719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.264434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAGA TCATTCTCGA TACCGAAACC ACCGGCCTGA ACGCCCGCAC GGGCGACCGC
CTCATCGAAA TCGGCTGCGT CGAGCTGCTG AACCGGCGGC TCACCGGCAA CAACCTGCAC
TTCTACGTGA ACCCCGAGCG CGACAGCGAT CCGGGCGCAC TGGCGGTGCA CGGCCTCACG
ACCGAATTCT TGAGCGACAA GCCGAAATTC GCGGAAGTCG CCCACCAGAT CCTCGACTTC
GTGAAGGACG CCGAGCTGAT CATCCACAAC GCGCCGTTCG ACCTGGGCTT CCTCGACGCC
GAATTCGCGC GGCTCGGCCT GCCGCCGTTC ACCGAGCATT GCGGCGGCGT GATCGACACG
CTGGTGCAGG CCAAGCAGAT GTTCCCCGGC AAGCGCAACT CGCTCGACGC GCTGTGCGAC
CGTTTCGGCA TCAGCAACGC GCACCGCACG CTGCACGGCG CACTGCTCGA CTCGGAACTG
CTCGCCGAGG TGTATCTCGC GATGACGCGC GGCCAGGACA GCCTCGTGAT CGACATGCTC
GACGACGCGG GCGCCGACGG CAGCGCGGCA AACGGCAAAC GCGTGTCGCT CGCCGCGCTC
GACCTGGCCG TGGTGGCCGC GAGCGAAGAC GAGCTGGCCG CGCACCAGGC TCAGCTCGAC
GAGCTCGACA AGTCGGTCAA GGGCACGTGC GTGTGGCGCC AGCCCGCCGA CACGGATACC
GCCGAAGCAG CCTGA
|
|---|
| Protein sequence | MRQIILDTET TGLNARTGDR LIEIGCVELL NRRLTGNNLH FYVNPERDSD PGALAVHGLT
TEFLSDKPKF AEVAHQILDF VKDAELIIHN APFDLGFLDA EFARLGLPPF TEHCGGVIDT
LVQAKQMFPG KRNSLDALCD RFGISNAHRT LHGALLDSEL LAEVYLAMTR GQDSLVIDML
DDAGADGSAA NGKRVSLAAL DLAVVAASED ELAAHQAQLD ELDKSVKGTC VWRQPADTDT
AEAA
|
|---|
| |