Gene Bcenmc03_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1243 
Symbol 
ID6122921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1365179 
End bp1366114 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content71% 
IMG OID641637817 
Productmalonate decarboxylase subunit beta 
Protein accessionYP_001764540 
Protein GI170732593 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR03133] malonate decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.522948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0801604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCG ACGTGATCCA CGACGCGCCG GCGTTCGTCG CGAATGCGGC GAGCTGGTAC 
GAAGCGTCGG CGCGGCAACG CATCGACGGG TTGCTCGACG CGGGCAGCTT CACGGAATTC
CTCGGGCCGG CCGAGCGCGT GACGAGCCCG CACCTGCCGC TGTTCGCGCT GCCGCAGCAG
TTCGACGACG GGATGGTGGT CGGCCACGGC CGGCTCGATG GCAAGCCGGT GTTCGTCGCC
GCGCAGGAGG GCCGCTTCAT GGGCGGCGCG TTCGGCGAAG TGCACGGCGC GAAGCTCACC
GGGCTGCTGC GCGCCGCGCG TGACGTCGGC AAGCCGGTGC TGATCCTGTT CGATACGGGC
GGCGTGCGGT TGCAGGAAGC GAACGCGGGC GAGCTCGCGA TCGCCGAGAT CATGCGCGCG
CTCGTCGACG TGCGGGCGGC CGGCGTGCCG GTGATCGGGC TGATCGGCGG GCGCGCGGGC
TGCTACGGCG GCGGCGGGCT GCTCGCTGCG TGCTGTTCGG CGCTCGCGGT GTCGGAGCAG
GGGCGCATCA GCGTGTCGGG GCCTGAAGTG ATCGAGACCA ATCGCGGCGT CGAGGAATTC
GACTCGAAGG ATCACGCGCT GATCTGGCGC ACGATGGGCG GCAAGCATCG GCGCTTGATC
GGCGGCGCCG ATCGTTACGT GGCCGATACG CCGGACGCGT TCCGCGCGGC CGCGCTCGAC
CTGATCGGCC GCGCGCCGAC GTTCGATGCG GCGATGCTGC GTGAGGAACA GGCGCGTCTC
GAAGCACGGA TCGAGCGGTT CGGCGGCTGC CGGGATGCGC TCGACGTGTG GCGTGCGCTC
GGGGCCGACG CGCCGGAAGT GATCCCCGGC ATGCCCGACG AAGAATTCGC CAAGCTCGCC
GACCAGTTAC AGGAGCCGCA GCATGACGCT CGATGA
 
Protein sequence
MMSDVIHDAP AFVANAASWY EASARQRIDG LLDAGSFTEF LGPAERVTSP HLPLFALPQQ 
FDDGMVVGHG RLDGKPVFVA AQEGRFMGGA FGEVHGAKLT GLLRAARDVG KPVLILFDTG
GVRLQEANAG ELAIAEIMRA LVDVRAAGVP VIGLIGGRAG CYGGGGLLAA CCSALAVSEQ
GRISVSGPEV IETNRGVEEF DSKDHALIWR TMGGKHRRLI GGADRYVADT PDAFRAAALD
LIGRAPTFDA AMLREEQARL EARIERFGGC RDALDVWRAL GADAPEVIPG MPDEEFAKLA
DQLQEPQHDA R