| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1238 |
|---|
| Symbol | |
|---|
| ID | 6122916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1360727 |
|---|
| End bp | 1361575 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641637812 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001764535 |
|---|
| Protein GI | 170732588 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.804975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.249608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCGT TACCGCCCGA ACTGCTGCGC AGCTTCGTCG CCGTCGCCCA GTCCGGCAGC
TTCACCGCCG CGTCCGAGCG CGTGAACCTG TCGCAGTCGA CCGTCAGCCA GCATATCCGC
CGCCTCGAGG AGCTGCTCGA CCGGCCGCTG TTCGAGCGCG ACACGCGCAA CGTGCACCTG
TCGCAGCACG GCGACGCGCT GTTCCGCTAC GCGGTGCGCA TCCTCGAGCT GATGGACGAG
GCCGTCACGT CGGTCTGCGG GCCGCCGCTG TCGGGCAAGG TGCGGCTCGC GATGTCGGAG
GATTTCGCGT CGGCGCACCT GACGGCCGCG CTCGCGAGCT TCGTGCAGCG CAACCCGGAC
GTCGAGCTCG CGATCTCGAC CGGGCTGTCG GGCGACCTGT TCGACGCGCT CGACGAAGGC
CGGCACGATC TCGTGTTCGC GAAACGCATC GCCGGCAGCC GGCGCGGCCG CGTGATCCGC
AGCGAACCGC TGTACTGGTG CACCGGCCCC GATTCGCGGA TCACCGGCCA CGAGGCCGTG
CTGCCGCTTG CAATGCATCC GGAGCCGAGC GTGTCGCGCC GCCGCGTGCT CGAATCGCTC
GAAGCCGTCG GGCGCCCTTA CCGGATCGCC GTCGTGAGCA GCAGCATCGC GGTGCTGCGG
GCGGCCGCGA GCGCGGGGCT CGGCGTCAGC GCGTTCGCCG GCTACGTGAT CCCGGCCGGG
CTCGCGCGAC TCGACGCGGG GCTGCCGGAA CTCGGCGAAC TCGAATACGT GATCGATCGC
CCGGCGGCCG CGTCGCGCTC CACACTCGCG CTCGAAGCCA CGTTGATCAC GGCGGCGGCC
GAGTTGTAA
|
|---|
| Protein sequence | MRPLPPELLR SFVAVAQSGS FTAASERVNL SQSTVSQHIR RLEELLDRPL FERDTRNVHL
SQHGDALFRY AVRILELMDE AVTSVCGPPL SGKVRLAMSE DFASAHLTAA LASFVQRNPD
VELAISTGLS GDLFDALDEG RHDLVFAKRI AGSRRGRVIR SEPLYWCTGP DSRITGHEAV
LPLAMHPEPS VSRRRVLESL EAVGRPYRIA VVSSSIAVLR AAASAGLGVS AFAGYVIPAG
LARLDAGLPE LGELEYVIDR PAAASRSTLA LEATLITAAA EL
|
|---|
| |