Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1181 |
Symbol | |
ID | 6122859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1292682 |
End bp | 1293455 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641637755 |
Product | ABC transporter related |
Protein accession | YP_001764478 |
Protein GI | 170732531 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0132418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.222462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCTGC TCGAACTCGA CGACCTCTGC GTCGCCTACG ACACGCCGCA CGGCCGCCGC ACCGTGGTCG ACGGCCTGAG CCTCGCGCTG CCGCGCGGCG ACATCGGCTG CCTGCTCGGC GCGTCCGGCT GCGGCAAGAC CACCGTGCTG CGCGCGATCG CCGGCTTCGA ACCCGTGCGC ATGGGGCGCA TCGTGCTGGA CGGCACGCCG GTCGCGGCGC CGTCGCTCGA CGTGCCGCCC GAGCGGCGGC GCATCGGCAT GATGTTCCAG GATTACGCGC TGTTTCCGCA CCTGAGCGCG GCCGACAACG TCGCGTTCGG CCTGCGGCGC ATGCCGAAGG GCGAACGGCG CCTGCGCGTC GCGGAGCTGC TCGACCTCGT CGGCCTCGCC GATTCCGGCG ACGCGTATCC GCACGAACTG TCGGGCGGCC AGCAGCAGCG CGTCGCCCTC GCACGCGCCC TCGCGCCATC GCCGGAATTG CTGCTGCTCG ATGAGCCGTT CTCGAATCTC GACGTCGATA CGCGCGAGCG GCTTGCGTTC GAGCTACGCG ACATCCTGAA GCACACGGGC CACACCGCGA TCCTCGTCAC GCACAATCAG GCGGAAGCGT TCGCGATCGC CGACCGGATC GGCGTGATGA AGGACGGCCG GCTCGCGCAA TGGGATACGC CGTATGCGCT GCACCATCAT CCGGCCAGCC CGTTCGTCGC GGATTTCGTG CGCCGCGACG CGCTGGCCGA CGAACGCGCG CGCGCCCTGG CGCGCGGCCG CTGA
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Protein sequence | MNLLELDDLC VAYDTPHGRR TVVDGLSLAL PRGDIGCLLG ASGCGKTTVL RAIAGFEPVR MGRIVLDGTP VAAPSLDVPP ERRRIGMMFQ DYALFPHLSA ADNVAFGLRR MPKGERRLRV AELLDLVGLA DSGDAYPHEL SGGQQQRVAL ARALAPSPEL LLLDEPFSNL DVDTRERLAF ELRDILKHTG HTAILVTHNQ AEAFAIADRI GVMKDGRLAQ WDTPYALHHH PASPFVADFV RRDALADERA RALARGR
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