Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1023 |
Symbol | |
ID | 6122703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1131213 |
End bp | 1132499 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641637593 |
Product | D-amino acid dehydrogenase small subunit |
Protein accession | YP_001764322 |
Protein GI | 170732375 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGTCG TCATTCTGGG CAGCGGTGTA GTGGGCGTGG CAAGCGCGTA TTACCTTGCG CGCGCCGGCC ATGAAGTCAC GGTGATCGAC CGGGAAGCCG GCCCGGCGCT GGAGACGAGT TTCGCGAACG CAGGCCAGAT CTCGCCCGGC TATGCGGCGC CGTGGGCCGC GCCCGGCGTG CCGCTGAAGG CCGTCAAATG GATGTTCGAA AAGCACGCGC CGCTCGCGAT CCGCCTCGAC GGCACGCGCT TCCAGCTCCA GTGGATGGTT CAGATGCTGC GCAACTGCAC GGCCGAGCGC TATGCAGTCA ACAAGGGCCG GATGGTCCGT CTCGCCGAAT ACAGCCGCGA CTGCCTGCAG GCGCTGCGCG CCGATACCGG CATCCAGTAC GAAGGCCGCA CGGGCGGCAC GCTGCAACTG TTCCGCACGC AGCAGCAGCT CGACGGCGCG GCGAAGGACA TCGCCGTGCT GCAGGAAGCG AACGTGCCGT TCGAACTGCT GTCGCCGGCC GAGTTGAAGC AAGCCGAGCC GGCGCTCGCC GCCGTCTCGC ACAAGCTGAC GGGCGGACTG CGCCTACCGG GCGATGAAAC GGGCGATTGC CAGCTGTTCA CGACGCGCCT CGCCGCGCTC GCCGAATCGC TCGGCGTCAA GTTCCGCTAC AACACGCCGA TCGATGCGCT CGCGATCGCG GGCGGCAAGA TCGCCGGCGT GCAGTGCGGC AACGAGACGG TGCGTGCGGA TGCGTACGTC GTCGCGCTCG GCTCGTACTC GACGAACTTC ATCTCGAACC TGATGAAGAT CCCCGTCTAT CCGCTGAAGG GCTATTCGAT CACCGCGCCG ATCGTCGACG CAGCGGCCGC GCCCGTATCG ACCGTGCTCG ACGAGACCTA CAAGATCGCG ATCACGCGCT TCGACCAGCG CATCCGCGTC GGCGGCATGG CGGAAATCGT CGGCTTCGAC AAGACGCTGC GCGCGGCGCG CCGCGAGACA CTCGAGATGT GCGTAAACGA CCTGTTCCCG GGCGGCGGCG ACACGTCGAA GGCCACGTTC TGGACGGGCC TGCGCCCAAT GACCCCGGAC GGCACGCCGA TCGTCGGCCG CACGCCGGTG TCGAACCTGT TCCTGAACAC CGGCCACGGC ACGCTCGGCT GGACGATGTC GTGCGGCTCG GGCCAACTCC TCGCGGACCT GATCTCCGGG AAGAAGCCGG CGATCCAGGC CGACGACCTG TCGGTGCATC GTTACCTGAA GGACGCGCCC GGCCAGACGC GCCCCGCCTA CGCGTAA
|
Protein sequence | MRVVILGSGV VGVASAYYLA RAGHEVTVID REAGPALETS FANAGQISPG YAAPWAAPGV PLKAVKWMFE KHAPLAIRLD GTRFQLQWMV QMLRNCTAER YAVNKGRMVR LAEYSRDCLQ ALRADTGIQY EGRTGGTLQL FRTQQQLDGA AKDIAVLQEA NVPFELLSPA ELKQAEPALA AVSHKLTGGL RLPGDETGDC QLFTTRLAAL AESLGVKFRY NTPIDALAIA GGKIAGVQCG NETVRADAYV VALGSYSTNF ISNLMKIPVY PLKGYSITAP IVDAAAAPVS TVLDETYKIA ITRFDQRIRV GGMAEIVGFD KTLRAARRET LEMCVNDLFP GGGDTSKATF WTGLRPMTPD GTPIVGRTPV SNLFLNTGHG TLGWTMSCGS GQLLADLISG KKPAIQADDL SVHRYLKDAP GQTRPAYA
|
| |