| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1009 |
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| Symbol | |
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| ID | 6122689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1116698 |
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| End bp | 1117870 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641637579 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_001764308 |
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| Protein GI | 170732361 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0748562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGG ATTTCTGGTG GTTGCTCGCG ATTCCGGTCG CGTTCGCGCT CGGTTGGGCG
GCGTCACGCT ATGACCTGAA GAATCTCCTG TCGGAGAGTG CCAACCTGCC GCGCTCGTAT
TTTCGCGGCC TCAATTTTCT GTTGAACGAA CAACCCGACA AGGCGATCGA TGCGTTCATC
GAGGTGGCCA AGCTCGATCC CGAAACGGTC GAGCTGCACT TCGCGCTCGG CAACCTGTTT
CGCCGTCGTG GCGAGACCGA CCGCGCGATC CGCGTGCACC AGAACCTGCT GAGCCGCACC
GACCTGCCGG TCAACGAGCG CGACCACGCG CTGTACGAAC TGGGGCAGGA TTTCCTGAAA
GCCGGCCTGC TGGATCGTGC CGAAGAGGCG TTCCACAAGC TCGCGGACGG CGACTACGCA
CTGGGTGCGC AGCGGGCGCT GCTGACGATC TACGAGATCG AGAAGGACTG GAACAAGTCG
ATCGACACGG CGAAGCGCAT CGAATCGATG AGCGACAAGC CGCTCGGCGT CGAAATTGCG
CAGTTTCACT GCGAACTCGC GCAGGACGCG CTGCAGCGCA AGAATGCTGC TGCAGCGGCC
GAACAGTTGC GCCTCGCGCT GACCGTGAAT CCGCAGAACG TCCGTGCGAC GGTGCTGTCC
GGCGACGCGG CGGAAGCGGC GGGCGACCAC GCGGCCGCGA TCGAGCGCTG GAAGCGCGTC
GAAGCGCAGA ACCCGGCGTA TCTGCCGCTC GTCGCCGACA AGCTGATGAA GGCGTACGTC
GCGCTCGGCA AGAACGCTGA AGGCGCCGAA CTGCTGATGG GGTACGTCGA TCGTTATCCG
TCGAACGACC TGCTCGACAT CGCCTATCAG CATATCGCCG GGTTGCGCGG CCAGGATGCG
GCGCACACAC TCGCGCGCAC GCAGATGGAA AAGTCGCCGA ACCTGTCGGG GATGCTGCAC
CTGCTCGATG CGCAGATCGC GGCGGCCGAG GAACCGCGTC GTAAGGAACT TGAAATGATG
CGTGCGCTGA TCAAGCAGCG CACGAAAAAT CTGCCACGGT ATACGTGCCA GAATTGCGGT
TTCCGGGCAC GGCTCTTCTA CTGGCAGTGC CCCGGATGCA GCGGCTGGGA AACCTATGCG
CCGCGCCGCG TCGAACCTGC GATGCCGGGC TGA
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| Protein sequence | MDLDFWWLLA IPVAFALGWA ASRYDLKNLL SESANLPRSY FRGLNFLLNE QPDKAIDAFI
EVAKLDPETV ELHFALGNLF RRRGETDRAI RVHQNLLSRT DLPVNERDHA LYELGQDFLK
AGLLDRAEEA FHKLADGDYA LGAQRALLTI YEIEKDWNKS IDTAKRIESM SDKPLGVEIA
QFHCELAQDA LQRKNAAAAA EQLRLALTVN PQNVRATVLS GDAAEAAGDH AAAIERWKRV
EAQNPAYLPL VADKLMKAYV ALGKNAEGAE LLMGYVDRYP SNDLLDIAYQ HIAGLRGQDA
AHTLARTQME KSPNLSGMLH LLDAQIAAAE EPRRKELEMM RALIKQRTKN LPRYTCQNCG
FRARLFYWQC PGCSGWETYA PRRVEPAMPG
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