| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0844 |
|---|
| Symbol | |
|---|
| ID | 6122525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 936996 |
|---|
| End bp | 937547 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641637408 |
|---|
| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
|---|
| Protein accession | YP_001764144 |
|---|
| Protein GI | 170732197 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0223023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCC AAGTAACGGC AACGGCGCTG CCCGAAGTTA AGATCATCGA GCCGAAGGTG
TTCGGCGACG CGCGCGGGTT CTTCTACGAA AGCTTCAACG GGAAGGAATT CGCCGAGCAG
GTTGCACCCG GCGTCGAATT CGTGCAGGAC AACCATTCGC GCTCGTCGAA GGGCGTGCTG
CGCGGCCTGC ACTATCAGAT CCAGCACGCG CAGGGCAAGC TCGTTCGCGT GGTCGAGGGC
GAAGTGTTCG ACGTCGCCGT CGACATTCGC AAGGATTCGC CCAACTTCGG CAAGTGGGTG
GGTGTGGTGC TGTCGAACGA CAACCATCGG CAACTGTGGG TGCCGCCCGG TTTCGCGCAC
GGGTTCGTCG TGCTGTCGGA GGCCGCACAG TTCCTCTACA AGACGACCGA CTACTGGTTT
CCGGAACACG AGCGTAGCAT CGTGTGGAAT GATCCGGAGA TCGGGATCGA GTGGCCGATC
GATTTCGAAC CGCTGCTGGC GGCGAAGGAT GCGGCCGGCA AGCGTTTGAG CGAAGCCGAA
GTTTATGCGT GA
|
|---|
| Protein sequence | MAIQVTATAL PEVKIIEPKV FGDARGFFYE SFNGKEFAEQ VAPGVEFVQD NHSRSSKGVL
RGLHYQIQHA QGKLVRVVEG EVFDVAVDIR KDSPNFGKWV GVVLSNDNHR QLWVPPGFAH
GFVVLSEAAQ FLYKTTDYWF PEHERSIVWN DPEIGIEWPI DFEPLLAAKD AAGKRLSEAE
VYA
|
|---|
| |