Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0823 |
Symbol | |
ID | 6122504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 917198 |
End bp | 919939 |
Gene Length | 2742 bp |
Protein Length | 913 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641637387 |
Product | hypothetical protein |
Protein accession | YP_001764123 |
Protein GI | 170732176 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.160742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00320377 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGACAGA ATTTTAAATT GACGGGTGTG GCGCTGTCGG TCGCGACGGT GTTCGGGGTG CTGGCTTCGG GTTCCGCGAT GGCGGGGGCG CTCGACTCGC TCCCGATCCC GCAGGTGATC GTCAATCCGC CGACGAACAG CGTGTCGGTC GGACTGGTCG CGACGGGCAC GTCGCCGCTG GGCTCGGTCA CCGTGACGGC GGGAGGGTCG GGCGCGATCC AGACATCGCT CGGCGAGCCG GGGCAAGTGC TGTCGGGCGC CGTGGGGGCG GTGACCGGCG CACTCGGTGG TAGCGGCGGC ACGGTGCAGC CGCTCGGGGC GGTGCAGGGC GTGGTGAATC AGGTGACGGG TGCGCTCGGT GGGGGCAACC CGGCTGGTGC GTTGACGGGA GCGCTGAACA CGGCGACGGG GACGCTGAGC AATGCGCTCG GCACGGCAAC GGGCGCACCG GGCGGCATCG GTGGCGGCGC GAACCCGTTG GCGCCGATTC AGGGTGTGGT GAATCAGGTA ACGGGTGCGC TGAGTGGCGG CAACCCGACC GGCGCATTGA CCGGTGCGCT GAATACGGCG ACGGGGACGC TGAGCAACGC GCTCGGCACG GCAACGGGCG CACTGGGCGG TATTGGTGGT GGCTCGAACC CGCTGGCACC GGTGCAAGGC GTCGTGAATC AGGTAACGGG TGCGCTCGGT GGCGGTAACC CGGCAGGTGC GCTGAGCGGT GCCGTGGGTA CGGTTACCGG CGCACTGGGC GGCATCGGCG GTGGCTCGAA CCCGCTGGCG CCCGTACAAG GTGTCGTGAG TCAGGTAACA GGTGCGCTCG GTGGCGGCAA TCCGGCAGGT GCGCTGAGCG GTGCCGTAGG TACGGTGACC GGCGCACTGG GCAATCTCGG CGGAGGTTCG AATCCGCTGG CAGCGGTTCA GGGTGTCGTG AACGGGCTCA CGGGTACGAT CGGCGGTGGC GATCCGGCCG GTGTACTCAC CGGCGTCGTT GGTACGGTCA CGGGGGCGCT GGGCAACCTC GGCAGCGGCT CGAACCCGCT GGCGCCGGTG CAAGGCGTAG TGAATGGCGT TACGGGCGCG CTTGGCGGCG GTAATCCGGC CGGTGCATTG ACCGGCGCGC TCGGCACGGT GACGGGCGCA CTGGGTGGCG TTGGCGGCGG CAACCCCGCT GGCGCATTGA CCGGCGCACT CGGCACGGTG ACGGGTGCAT TGGGCGGTGT TGGCGGCGGT AATCCGACCG GCGCCTTGAC TGGCGCCCTC GGCACGGTGA CGGGCGCATT GGGCGGTGTT GGCGGCGGTA ATCCGACCGG CGCATTGACC GGCGCCCTCG GCACGGTGAC GGGCGCATTG GGCGGTGTTG GCGGCGGTAA CCCGGCCGGC GCATTGACCG GCGCCCTCGG CACGGTGACG GGCGCATTGG GCGGCATCGG CGGTGGCAAC CCCGCTGGCG CACTGACCGG CGCCCTCGGC ACCGTAACCG GCGCCCTGGG CAACCTCGGC GGCGGCGCGA ACCCGATCAC CCCGATCCAG AACATCGTGA ACCAGGTCAC GGGCACGCTC GGCAGCGGCA ACCCGACCGG CGCACTGAGC AACGCGGTCA ACACGATCAC TGGCACGCTG GGCAACGTCG GCGGTGCAGG CAGCCCGCTC GCGCCGGTGC AAGGCGTCGT CACGCAACTC GCCGGCACGC TCGGCAACGG CGATCCTGCG GGTGCGCTGA CGAACGCACT GAACTCGGTG ACGGGCGCGC TCAGCGGCGC GAACCCGCTG GCGCCGGTGC AGGGCGTCGT GAACCAGGTC GTCGGCACGC TGTCGGGTGC AGGCGGCGGC AGCCCGATCA CGCCGATCAC GAACCTCGTC AACGGTTTGC AGAACGCCCT GCCGGGCGGC AATCCGGCCG GCGCGCTGAC CGGCGCACTC GGTTCGGTGA CGGGCGCGCT CGGCAACCTC GGCGGCACGA ACCCGCTGGC GCCGGTGCAA GGCGTCGTCA ACCAGGTCGT CGGCACGCTC GGCGGCAGCA ACCCGGCCGG CACGCTGAGC AACGTGGTCG GGACGGCCAC GGGCGCCCTC GGCAACGCGG TCGGCTCGGT GGCCGGTGCG CTCGGCGCGC TGGGCGGCAC GAGCCCGCTG GCGCCGGTGC AGGGCGTCGT GAACCAGGTC GTCGGTACGC TCGGCAGCGG CAATCCGGCC GGTGCACTGA CGGGCGCGCT GAACTCGGTG ACGGGTGCCC TCGGCAACCT CGGCGGCTCC AATCCGCTGG CGCCGGTGCA AGGCGTCGTC AACCAGGTGG TTGGCACACT GTCCGGTGCG GCCGGCAATA GCCCGATCGC CCCGATCACG AACCTCGTGA GCGGCCTGAC GGGCGGCGGC AACCCGGCCG GCGCACTGAC CGGTGCGCTC GGTTCGGTGA CGGGCGCACT CGGGTCCGGT CCGGCGGCGC TCGGCCAGGC GGCCGGCGCG CTGTCGGGGG CGGCCGGTTC GACGGCAGCG GCGGGCGGCA GCCTGCTCGG CGCGGGCGCG AATGCGGCCG GCGGTACGGC CGGCGCGGTC GGTTCGCTGC TGACGACGGG CGCCAACTCG ACGGCGACGG TCGTCAATGC GGCCGGCACG TCGGTGGGCA CGGTGCTCGG TTCCGCGCCG GGCCTGTCGG TGACGCCGCA TTCGGGCAAC GGCTCGGCGA ACAACCCGCT CGCACCGGTG ACGACACTGC TTCAGTCGCT GACCGGCGCA CTGCCGAGGT AA
|
Protein sequence | MGQNFKLTGV ALSVATVFGV LASGSAMAGA LDSLPIPQVI VNPPTNSVSV GLVATGTSPL GSVTVTAGGS GAIQTSLGEP GQVLSGAVGA VTGALGGSGG TVQPLGAVQG VVNQVTGALG GGNPAGALTG ALNTATGTLS NALGTATGAP GGIGGGANPL APIQGVVNQV TGALSGGNPT GALTGALNTA TGTLSNALGT ATGALGGIGG GSNPLAPVQG VVNQVTGALG GGNPAGALSG AVGTVTGALG GIGGGSNPLA PVQGVVSQVT GALGGGNPAG ALSGAVGTVT GALGNLGGGS NPLAAVQGVV NGLTGTIGGG DPAGVLTGVV GTVTGALGNL GSGSNPLAPV QGVVNGVTGA LGGGNPAGAL TGALGTVTGA LGGVGGGNPA GALTGALGTV TGALGGVGGG NPTGALTGAL GTVTGALGGV GGGNPTGALT GALGTVTGAL GGVGGGNPAG ALTGALGTVT GALGGIGGGN PAGALTGALG TVTGALGNLG GGANPITPIQ NIVNQVTGTL GSGNPTGALS NAVNTITGTL GNVGGAGSPL APVQGVVTQL AGTLGNGDPA GALTNALNSV TGALSGANPL APVQGVVNQV VGTLSGAGGG SPITPITNLV NGLQNALPGG NPAGALTGAL GSVTGALGNL GGTNPLAPVQ GVVNQVVGTL GGSNPAGTLS NVVGTATGAL GNAVGSVAGA LGALGGTSPL APVQGVVNQV VGTLGSGNPA GALTGALNSV TGALGNLGGS NPLAPVQGVV NQVVGTLSGA AGNSPIAPIT NLVSGLTGGG NPAGALTGAL GSVTGALGSG PAALGQAAGA LSGAAGSTAA AGGSLLGAGA NAAGGTAGAV GSLLTTGANS TATVVNAAGT SVGTVLGSAP GLSVTPHSGN GSANNPLAPV TTLLQSLTGA LPR
|
| |