Gene Bcenmc03_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0793 
Symbol 
ID6122474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp881213 
End bp882382 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content69% 
IMG OID641637357 
Productmajor facilitator transporter 
Protein accessionYP_001764093 
Protein GI170732146 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGC CTCTTTTCGC CCTTGCCGTC GCCGCATTTG GAATCGGTAC CACCGAATTC 
GTGATCATGG GGCTGCTGCC CAATGTCGCG CGCGACCTCG GCGTGTCGAT TCCGGCCGCC
GGGATGCTCG TGTCGGGCTA CGCGCTCGGC GTGACGATCG GCGCGCCGAT CCTCGCGATC
GTCACCGCGA AGATGCCGCG CAAGCGTGCG CTGATGAGCC TGATCGGGCT GTTCATCGCC
GGCAACCTGT TCTGCGCGAT CGCGCCCGGC TACGCGGTGC TGATGGCCGC GCGCGTCGTC
ACCGCGTTCT GCCACGGTGC GTTCTTCGGC ATCGGCTCGG TGGTCGCGAG CAACCTCGTC
GCACCGAACC GCCGCGCGCA GGCGATCGCG CTGATGTTCA CCGGCCTCAC GCTCGCGAAC
GTGCTCGGCG TGCCGCTCGG CACCGCACTC GGCCAGGCGT TCGGCTGGCG CACGACGTTC
TGGGCCGTCA CCGGCATCGG CATCGCCGCG GCCGCCGCGC TCGCGGTGTG CCTGCCGAAG
AACCTCGCGA TGCCCGACAC CAGCATCACG CGCGAATTCA GCGTGCTGAA GCACCCGCAG
GTGCTGATGG TGCTCGGCAT CAGCGTGCTC GCGTCCGCGA GCCTGTTCAG CGTATTCACG
TACATCACGC CGATCCTCGA GGACGTGACG GGCTTCTCGC CGCGCCAGGT CACCTACGTG
CTGCTGCTGT TCGGCCTCGG CCTGACCGTC GGCGGCACGC TCGGCGGCAA GCTCGCCGAC
TGGCGCCGGA TGCCGTCGCT GATCGCGACG CTCGCGCTGA TCGGTATCGT CCTCGCGCTG
TTCGCGGGCA CGATGCATCT GCCGTTCGCC GCGCTCGCGA CGATCTTCGT GTGGGGCATC
CTCGCGTTCG CGATCGTGCC GCCGCTGCAG ATCATGATCG TCGATCGCGC GAGCGACGCG
CCGAACCTCG CGTCGACGCT CAACCAGGGC GCGTTCAATC TCGGCAACGC GACCGGCGCG
TGGCTCGGCG GGATGGCGAT CGGCTCGGGC GTGTCGCTCG TGAGCCTGCC GTGGGTCGGC
GTCGCGATGG CGATCGCCGC GCTCGCGCTC ACGCTGTGGT CGGCGTCGCT CGAACGCCGG
CCGGTGGTCG TGCCGACCGA GTACGTCTGA
 
Protein sequence
MPLPLFALAV AAFGIGTTEF VIMGLLPNVA RDLGVSIPAA GMLVSGYALG VTIGAPILAI 
VTAKMPRKRA LMSLIGLFIA GNLFCAIAPG YAVLMAARVV TAFCHGAFFG IGSVVASNLV
APNRRAQAIA LMFTGLTLAN VLGVPLGTAL GQAFGWRTTF WAVTGIGIAA AAALAVCLPK
NLAMPDTSIT REFSVLKHPQ VLMVLGISVL ASASLFSVFT YITPILEDVT GFSPRQVTYV
LLLFGLGLTV GGTLGGKLAD WRRMPSLIAT LALIGIVLAL FAGTMHLPFA ALATIFVWGI
LAFAIVPPLQ IMIVDRASDA PNLASTLNQG AFNLGNATGA WLGGMAIGSG VSLVSLPWVG
VAMAIAALAL TLWSASLERR PVVVPTEYV