| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0690 |
|---|
| Symbol | tgt |
|---|
| ID | 6122371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 755935 |
|---|
| End bp | 757122 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641637253 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_001763990 |
|---|
| Protein GI | 170732043 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.265074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.561084 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAG GTTCATCCCA CGATACGCAC GCCCCCGTGC AGGACCGCCC GGCCAACGGG
CTCGAATTCG AATTGCTGAC GACCGACGGC CACGCGCGCC GCGGCCGCGT GAAGCTCAAT
CACGGCACGG TCGAGACGCC GATCTTCATG CCGGTCGGCA CGTACGGCAC CGTGAAGGCG
ATCCAGCCGC GCGAGCTGCA CGAGATCAAG GCCCAGATCA TCCTCGGCAA CACGTTCCAC
CTGTGGCTGC GCCCGGGCCT CGACACGATC GACGCGCACG GCGGCCTGCA CGGCTTCATG
GGCTGGAACA AGCCGATCCT GACCGATTCG GGCGGCTTCC AGGTGTTCTC GCTCGGCGAC
CTGCGCAAGA TCACCGAGGA CGGCGTCACG TTCGCGTCGC CGATCAACGG CGACAAGCTG
TTCCTGTCGC CGGAAGTGTC GATGCAGATC CAGAAGGTGC TGAACTCCGA CGTCGTGATG
CAGTTCGACG AATGCACGCC GTACGCGACC AACGGCGTGC CGACCACGCA CCAGGAAGCG
GCCGACTCGA TGCGCATGTC GCTGCGCTGG GCGAAGCGCT CGCTCGACGA GTTCCACCGG
CTCGGCAACC CGAATGCGCT GTTCGGGATC GTCCAGGGCG GGATGTTCGA GGACCTGCGC
GACGAATCGC TCGCGGGCCT CGCGGAACTC GGCTTCCACG GCCTCGCGAT CGGCGGGCTG
TCGGTGGGCG AGCCGAAGGA AGACATGATG CGCGTGCTGC AGCACGTGGG CCCGAAGCTG
CCGGCCAACA AGCCGCACTA CCTGATGGGC GTGGGCACGC CGGAGGATCT GGTCGAGGGC
GTCGCGAACG GCATCGACAT GTTCGACTGC GTGATGCCGA CCCGCAACGC GCGCAACGGC
TGGCTCTTCA CGCGCTTCGG CGACGTGAAG ATCCGCAACG CGACGCACAA GAACTCGTTG
AAGCCGCTCG ATTCGACCTG CACCTGCTAC ACGTGCCAGA ACTTCTCGCG CGGCTACCTG
CATCACCTGC ACCGGGTCGG CGAAATCCTC GGCGCGCAGC TGAACACGAT CCACAACCTG
CACTACTACC TGCAGCTGAT GAGCGAGATC CGCGACGCGA TCGAAACGCA TACGTTCGAC
GCATTCCGGC AGCGCTTCGC GGAGGATCGC GCGAGAGGGG TCGACTGA
|
|---|
| Protein sequence | MTEGSSHDTH APVQDRPANG LEFELLTTDG HARRGRVKLN HGTVETPIFM PVGTYGTVKA
IQPRELHEIK AQIILGNTFH LWLRPGLDTI DAHGGLHGFM GWNKPILTDS GGFQVFSLGD
LRKITEDGVT FASPINGDKL FLSPEVSMQI QKVLNSDVVM QFDECTPYAT NGVPTTHQEA
ADSMRMSLRW AKRSLDEFHR LGNPNALFGI VQGGMFEDLR DESLAGLAEL GFHGLAIGGL
SVGEPKEDMM RVLQHVGPKL PANKPHYLMG VGTPEDLVEG VANGIDMFDC VMPTRNARNG
WLFTRFGDVK IRNATHKNSL KPLDSTCTCY TCQNFSRGYL HHLHRVGEIL GAQLNTIHNL
HYYLQLMSEI RDAIETHTFD AFRQRFAEDR ARGVD
|
|---|
| |