Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0687 |
Symbol | secF |
ID | 6122368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 752277 |
End bp | 753227 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641637250 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_001763987 |
Protein GI | 170732040 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATTTT TCCGCATCCG TAAAGACATT CCGTTCATGC GGCACGCGCT GGTGTTCAAC GTGATCTCGC TGGTCACGTT CCTCGCCGCC GTGTTCTTCC TGTTCCACCG CGGGCTGCAC CTGTCCGTCG AATTCACCGG CGGTACGGTG ATCGAGGTGC AGTACCAGCA GGCCGCGGAA CTCGAACCCG TGCGCGCGAC GCTCGGCAAG CTCGGCTATG CCGACGCGCA GGTGCAGAAC TTCGGCACGT CGCGCAACGT GCTGATCCGC CTGCAACTGA AGGAAGGCCT CACATCCGCG CAGCAGAGCG ACCAGGTGAT GGGCGCGCTG AAGGCGCAGA GCCCGGACGT CACGCTGCAG CGCGTCGAGT TCGTCGGCCC GCAGGTCGGC CGCGAGCTCG CGACCGACGG CCTGCTCGCG CTCGCGTGCG TCGTGATCGG CATCGTGATC TACCTGTCGT TCCGCTTCGA ATGGAAGTAC GCGGTGGCGG GCATCATCGC CAACCTGCAC GACGTCGTGA TCATTCTCGG CTTCTTCGCG TTCTTCCAGT GGGAGTTCTC GCTGGCGGTG CTCGCGGCGA TCCTCGCGGT GCTCGGCTAC TCGGTCAACG AGTCGGTCGT CATCTTCGAC CGGATCCGCG AGACGTTCCG CCGCGAACGC AAGATGAGCG TGCAGGAAGT GATCAACCAC GCGATCACGA CCACGATGTC GCGCACGATC ATCACCCACA CGTCGACGGA AATGATGGTG CTGTCGATGT TCTTCTTCGG CGGCCCGACG CTGCACTACT TCGCGCTCGC GCTGACGGTC GGCATCATGT TCGGTATCTA CTCGTCGGTG TTCGTCGCGG GCTCGCTCGC GATGTGGCTC GGCATCAAGC GCGAAGACCT GGTCAAGGAA AAGAAGACCG CGCACGATCC GGACGATCCG AACGCCGGCG CGCAGGTTTG A
|
Protein sequence | MEFFRIRKDI PFMRHALVFN VISLVTFLAA VFFLFHRGLH LSVEFTGGTV IEVQYQQAAE LEPVRATLGK LGYADAQVQN FGTSRNVLIR LQLKEGLTSA QQSDQVMGAL KAQSPDVTLQ RVEFVGPQVG RELATDGLLA LACVVIGIVI YLSFRFEWKY AVAGIIANLH DVVIILGFFA FFQWEFSLAV LAAILAVLGY SVNESVVIFD RIRETFRRER KMSVQEVINH AITTTMSRTI ITHTSTEMMV LSMFFFGGPT LHYFALALTV GIMFGIYSSV FVAGSLAMWL GIKREDLVKE KKTAHDPDDP NAGAQV
|
| |