Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0564 |
Symbol | |
ID | 6122245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 619335 |
End bp | 622340 |
Gene Length | 3006 bp |
Protein Length | 1001 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641637127 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_001763864 |
Protein GI | 170731917 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00066464 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAACCA CCGACAACGC GACGTCCCAG TACGAGAGCG CCTCGAGCCG TCCGCTCGGC GGGACCGAAC AAGGCGCGAA GGCGCTCGCG CCGCAGGCCA CGTTCGCCGA CTACAAGGTG ATCCGCCGCA ACGGCAGCGT GGTGTCGTTC GAACCTTCGA AGATCGCGAT CGCGGTGACC AAGGCTTTCC TGGCCGTCAA TGGCGGGCAG GGCGCGGCAT CGGCGCGCGT ACGCGAGCAG GTCGAGCAAC TGACGCACAA CGTCGTTCGC GCGCTCGTGC GCAGCCGCCC GAACGGCGGT ACGTTCCATA TCGAAGACAT CCAGGACCAG GTCGAACTCG CGCTGATGCG CGGCGGCGAG CACAACGTCG CGCGTGCGTA CGTGCTGTAT CGCGAGAAGC GTCACCTCGA GCGCCAGCAT GCGGGCGAGG AAGCGGCGGC AGCGGGCGGC GAGTCGGCCA CCGGCATCAA CGTGGTCGAC AACGGCGTCA CGCGCCCGCT CGACCAGAAC GCGCTGCGCG CGCTGATCGT GTCGGCATGC GACGGCCTCG GCGCTGCGGT TAACCCTGAC CCGATCGTCG CGGAGACGGT GAAGAACCTG TACGACGGCG TGCCGATGAG CCAGGTCTAC GACTCGGCGA TCCTCGCTGC GCGCACGATG ATCGAAAAGG ACCCGGCGTA CAGCCAGGTC ACGGCCCGCA TCCTGCTGCA CACGATCCGT CGCGAGATCC TCGGCGAGGA AGTCGTGCAG GCCGAGATGT CGACCCGCTA CGCCGAATAC TTCCCGCAGT TCCTGAAGCG CGGCGTCGAC GCCGGCCTGC TCGACGACAA GCTGCTGCAG TTCGACCTGA AGCGCCTCGG CGAAGCGCTC GACGCGAACC GCGACCTGCA GTTCGGCTAC CTCGGCCTGC AGACGCTGTA CGACCGCTAC TTCCTGCACG TCGAAGGCAC CCGCATCGAA ATGCCGCAGG CATTCTTCAT GCGCGTCGCG ATGGGCCTGT CGCTGAACGA GATCGACCGC GAAACGCGCG CGATCGAGTT CTACAACGTG CTGTCGAGCT TCGACTTCAT GAGCTCGACG CCGACGCTGT TCAACTCGGG CACGCACCGC TCGCAGCTGT CGTCGTGCTA CCTGACGACG GTCGCGGACG ATCTCGACGG CATCTATGAA GCGCTGAAGG AAAACGCGCT GCTGTCGAAG TTCGCCGGCG GCCTCGGCAA CGACTGGACG CGCGTGCGCG CCCTCGGCTC GCATATCAAG GGCACGAACG GCAAGTCGCA AGGCGTGGTC CCGTTCCTGA AGGTCGTGAA CGACACGGCC GTCGCGGTGA ACCAGGGCGG CAAGCGCAAG GGCGCGGTCT GCGCGTACCT CGAATCGTGG CACCTCGACA TCGAGGAGTT CCTGGAGCTG CGCAAGAACA CCGGTGACGA CCGTCGCCGT ACGCACGACA TGAACACGGC GAACTGGATT CCCGACCTGT TCATGAAGCG CGTGATGGAA GGCGGCGACT GGACGCTGTT CTCGCCGTCG ACCTGCCCGG ACCTGCACGA CAAGTTCGGC GCCGATTTCG AGAAGGCTTA CACGGCTTAC GAAGACAAGG TCGCGCGCGG CGAGATCAAG CTGTTCAAGA AGATCCCGGC GGCGCAGCTG TGGCGCAAGA TGCTCGGCAT GCTGTTCGAG ACGGGCCACC CGTGGATCAC GTTCAAGGAT CCGTGCAACG TGCGCTCGCC GCAGCAGCAC GTCGGCGTCG TCCACTCGTC GAACCTGTGC ACGGAAATCA CGCTGAACAC GAGCGACACC GAAATCGCGG TGTGCAACCT CGGCTCGGTG AACCTCGTCG CCCACCTGGT GAAGCAGGCC GACGGCAGCT ACGCGCTCGA CCACGACAAG CTGAAGCGCA CGATCAGCGT CGCGATGCGC ATGCTCGACA ACGTGATCGA CATCAACTAC TACGCGGTGC CGAAGGCGCG TAACTCGAAC CTGAAGCACC GCCCGGTCGG GATGGGCATC ATGGGCTTCC AGGACTGCCT GCACCTGCTG CGTACGCCGT ACGCGTCGCA AGAGGCAGTC GAGTTCGCCG ATCGTTCGAT GGAAGCCGTC TGCTATTACG CGTACCACGC GTCGACCGAA CTGGCCGAAG AACGCGGCCG CTACTCGAGC TACCGCGGCT CGCTGTGGGA TCGCGGCATC CTCCCGCAGG ACACGCTGAA GCTGCTGGCC GAAGCGCGCG GCGGCTACGT CGAGGTCGAC ACGTCGGAAT CGCTCGACTG GACGGCGCTG CGTGCGCGGA TCGCCACGCA CGGCATGCGC AACTCGAACT GCGTCGCGAT CGCGCCGACG GCGACGATCT CGAACATCAT CGGCGTGTCG GCCTGTATCG AGCCGACCTT CCAGAACCTG TACGTGAAGT CGAACCTGTC GGGCGAATTC ACGGTGGTGA ACGAGTATCT CGTCCGCGAC CTGAAGGAAC GCGGCCTGTG GGACGAAGTG ATGGTCGCCG ACCTGAAGTA CTTCGACGGC ATGCTGTCGC GCATCGACCG CATCCCGGCC GACCTGCGCG CGATCTACGC GACCGCGTTC GAGGTCGACC CGACGTGGCT GGTCGAAGCG GCATCGCGTC GCCAGAAGTG GATCGACCAG GCGCAGTCGC TGAACATCTA CATGGGCGGC GCATCGGGCA AGAAGCTCGA CGAGGTCTAC AAGCTCGCAT GGCTGCGCGG CCTGAAGACG ACCTACTACC TCCGCACGAT GGCGGCGACG CACGTCGAGA AGTCGACGGT CGCACACGGT GCGCTGAACG CAGTGCCGAC GGGCGGTGCC GGCAGCGGCG GCTCGAGCAG CGGCGGCGCG CAAGGCGCAG CGGGCGGCTT CGGTGCGGCA GGCGGCGCTG CATCGTCGGG CGCGGTCAAC GCTGCAGCGG CGCTCGCGCC GGTCGAAGCA GACGGCCCGG TGTGCACGAT GCGTCCGGGC GACCCCGGCT TCGACGAATG CGAAGCGTGC CAGTAA
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Protein sequence | MQTTDNATSQ YESASSRPLG GTEQGAKALA PQATFADYKV IRRNGSVVSF EPSKIAIAVT KAFLAVNGGQ GAASARVREQ VEQLTHNVVR ALVRSRPNGG TFHIEDIQDQ VELALMRGGE HNVARAYVLY REKRHLERQH AGEEAAAAGG ESATGINVVD NGVTRPLDQN ALRALIVSAC DGLGAAVNPD PIVAETVKNL YDGVPMSQVY DSAILAARTM IEKDPAYSQV TARILLHTIR REILGEEVVQ AEMSTRYAEY FPQFLKRGVD AGLLDDKLLQ FDLKRLGEAL DANRDLQFGY LGLQTLYDRY FLHVEGTRIE MPQAFFMRVA MGLSLNEIDR ETRAIEFYNV LSSFDFMSST PTLFNSGTHR SQLSSCYLTT VADDLDGIYE ALKENALLSK FAGGLGNDWT RVRALGSHIK GTNGKSQGVV PFLKVVNDTA VAVNQGGKRK GAVCAYLESW HLDIEEFLEL RKNTGDDRRR THDMNTANWI PDLFMKRVME GGDWTLFSPS TCPDLHDKFG ADFEKAYTAY EDKVARGEIK LFKKIPAAQL WRKMLGMLFE TGHPWITFKD PCNVRSPQQH VGVVHSSNLC TEITLNTSDT EIAVCNLGSV NLVAHLVKQA DGSYALDHDK LKRTISVAMR MLDNVIDINY YAVPKARNSN LKHRPVGMGI MGFQDCLHLL RTPYASQEAV EFADRSMEAV CYYAYHASTE LAEERGRYSS YRGSLWDRGI LPQDTLKLLA EARGGYVEVD TSESLDWTAL RARIATHGMR NSNCVAIAPT ATISNIIGVS ACIEPTFQNL YVKSNLSGEF TVVNEYLVRD LKERGLWDEV MVADLKYFDG MLSRIDRIPA DLRAIYATAF EVDPTWLVEA ASRRQKWIDQ AQSLNIYMGG ASGKKLDEVY KLAWLRGLKT TYYLRTMAAT HVEKSTVAHG ALNAVPTGGA GSGGSSSGGA QGAAGGFGAA GGAASSGAVN AAAALAPVEA DGPVCTMRPG DPGFDECEAC Q
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