Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0550 |
Symbol | |
ID | 6124869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 606618 |
End bp | 607613 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641637113 |
Product | polyprenyl synthetase |
Protein accession | YP_001763850 |
Protein GI | 170731903 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000400591 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0346751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCGT CCACCGCCTC CCCCACCCTC AGCGCCGCCC ACCTGCTCGC CCCGATCACC AGCGACATGG AGCAGGTGAA TCGCGTTATC CGGCAAAGCC TCGCGTCCGA CGTGCTGCTG ATCAACCAGA TCGCCGAGTA CATCATCGGC GCGGGCGGCA AACGGCTGCG TCCGGCGTTG CTGCTGCTCG TCGCCGGCGC GCTCGGCGAA ACGTCGCACC AGCGGCACGT GCTGGCCGCC GTCGTCGAGT TCATCCACAC GGCCACGCTG CTGCATGACG ACGTCGTCGA CGAATCCGAA CTGCGCCGCG GCCGTCAGAC CGCCAATGCG CTGTTCGGCA ACGCGGCGAG CGTGCTGGTA GGCGATTACC TCTACTCGCG CTCGTTCGAG ATGATGGTCG GCGTCGGCAA GATGCGCGTG ATGGAGATCC TGTCCGAAGC GACGACGATC ATTTCCGAAG GCGAGGTGCT GCAGCTCCTC AATATGCACG ACGCGGACGT CGACGAAACG CGCTACATGC AGGTGATCCG CTACAAGACG GCGAAGCTGT TCGAGGCATC GGCACGCCTG GGCGCGGTGC TCGCGGGCGC CGATGCGCCC ACCGAGGCCG CCGCCGCCGA ATACGGCCGC CGGATCGGCA CCGCATTCCA GATCATGGAC GACTGGCTCG ACTATGCCGG CACCGCCGAG GCGATGGGCA AGAATGCCGG CGACGACCTG CGCGAAGGCA AGCCGACGCT GCCGCTCATC TATCTGATCG AACGCGGCAC CCCCGAACAG TCGGCGCTCG CACGCGAGGC GATCGAACAG GGCGGCACCG ATCGCTTCGA CACGATTTTC GAAGCGATCA CGCGCTCGGG TGCGCTCGAT CACACGCTCG AATGCGCACG TCAGGAAGCC CAGGCGGCGG CAGCGGCGAT TGCCGCGTTC CCCGACTCGA TCTACAAGGA AAGCCTGCTC GGGTTGTGCT CGTACTCGAC GTCGCGGCAG TCATGA
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Protein sequence | MSSSTASPTL SAAHLLAPIT SDMEQVNRVI RQSLASDVLL INQIAEYIIG AGGKRLRPAL LLLVAGALGE TSHQRHVLAA VVEFIHTATL LHDDVVDESE LRRGRQTANA LFGNAASVLV GDYLYSRSFE MMVGVGKMRV MEILSEATTI ISEGEVLQLL NMHDADVDET RYMQVIRYKT AKLFEASARL GAVLAGADAP TEAAAAEYGR RIGTAFQIMD DWLDYAGTAE AMGKNAGDDL REGKPTLPLI YLIERGTPEQ SALAREAIEQ GGTDRFDTIF EAITRSGALD HTLECARQEA QAAAAAIAAF PDSIYKESLL GLCSYSTSRQ S
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