| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0489 |
|---|
| Symbol | |
|---|
| ID | 6122170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 530604 |
|---|
| End bp | 532271 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641637046 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001763789 |
|---|
| Protein GI | 170731842 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.890406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAAT ACGTTTTCAC GATGAACCGG GTCGGCAAGA TCGTGCCGCC CAAGCGCCAG
ATCCTGAAGG ACATCTCGCT GTCGTTCTTT CCCGGCGCGA AGATCGGCGT GCTCGGCCTG
AACGGCTCGG GCAAGTCGAC GCTGATCCGC ATCATGGCGG GCGTCGACAA GGACATCGAA
GGCGAAGCCA CGCCGATGCC GAACCTGAAC ATCGGCTACC TGCCGCAGGA ACCGCAGCTC
GATCCGACGA AGACCGTGCG CGAAGCCGTC GAGGAAGGCC TCGGCGACCT GTTCCAGGCG
AACAAGAAGC TGGAAGAAAT CTACGCGGCA TACGCCGAAC CGGACGCCGA CTTCGACGCG
CTCGCGGCCG AGCAGGCGAA ATACGAGGCG ATCCTCGCGT CGAGCGACGG CGGCAGCCCC
GAGCAGCAGC TCGAAGTGGC CGCCGACGCG CTGCGCCTGC CGCCATGGGA CGCCAAGATC
GAGCACCTGT CGGGCGGTGA AAAGCGCCGC GTCGCGCTGT GCAAGCTGCT GCTCGAGAAG
CCCGACATGC TGCTGCTCGA CGAACCGACC AACCACCTCG ACGCCGAATC GGTCGACTGG
CTCGAGCAGT TCCTGGTGCG CTTCCCGGGC ACCGTGGTCG CCGTCACGCA CGATCGCTAC
TTCCTCGACA ACGCGGCCGA GTGGATTCTC GAACTCGACC GCGGCCACGG CATTCCGTGG
AAGGGCAACT ACAGCAGCTG GCTCGACCAG AAGGAAGAGC GCCTGAAGCA GGAAGAGGCG
TCGGAATCGG CACGCCAGAA GGCCATCAAG AAGGAACTGG AGTGGGTGCG CCAGAACCCG
AAGGGCCGCC AGGCGAAGTC GAAGGCGCGT ATCGCCCGCT TCGAGGAGCT GAGCAGCCAG
GAATACCAGA AGCGCAACGA AACGCAGGAA ATCTTCATTC CGGCCGGCGA GCGCCTCGGC
AACGAAGTGA TCGAGTTCAA GAACGTCAGC AAGTCGTTCG GCGACCGCCT GCTGATCGAC
AACCTGAGCT TCAAGATCCC GGCCGGCGCG ATCGTCGGCA TCATCGGCCC GAACGGCGCC
GGCAAGTCGA CGCTGTTCAA GATGCTGACG GGCAAGGAAC AGCCGGATTC GGGCGAAGTC
GTGATGGGCC CGACGGTGAA GCTCGCATAC GTCGACCAAA GCCGCGACGC GCTCGACGGT
TCGAAGACGG TGTTCGAGGA AATCTCGGGC GGCGCCGACG TGCTGACGGT CGGCAAGTAC
GAAACGCCGT CGCGCGCGTA TATCGGCCGC TTCAACTTCA AGGGCGGCGA CCAGCAGAAG
ATCGTCGGCA ACCTGTCCGG CGGCGAACGC GGCCGCCTGC ACCTCGCCAA GACGCTGATC
TCGGGCGGCA ACGTGCTGCT GCTGGACGAA CCGTCGAACG ACCTCGACGT CGAAACGCTG
CGCGCGCTGG AAGACGCGCT GCTCGAATTC GCGGGCTCGG TGATGGTGAT CTCGCACGAT
CGGTGGTTCC TCGACCGGAT CGCGACGCAC ATCCTCGCGT TCGAAGGCGA TTCGCAGGTC
ACGTTCTTCG ACGGCAACTA CCAGGAGTAC GAAGCCGACA AGCGTGCGCG CCTCGGCGAG
GAAGCCGCGA AGCCGAAGCG TCTGCGCTAC AAGCCGATCA GCCGCTGA
|
|---|
| Protein sequence | MAQYVFTMNR VGKIVPPKRQ ILKDISLSFF PGAKIGVLGL NGSGKSTLIR IMAGVDKDIE
GEATPMPNLN IGYLPQEPQL DPTKTVREAV EEGLGDLFQA NKKLEEIYAA YAEPDADFDA
LAAEQAKYEA ILASSDGGSP EQQLEVAADA LRLPPWDAKI EHLSGGEKRR VALCKLLLEK
PDMLLLDEPT NHLDAESVDW LEQFLVRFPG TVVAVTHDRY FLDNAAEWIL ELDRGHGIPW
KGNYSSWLDQ KEERLKQEEA SESARQKAIK KELEWVRQNP KGRQAKSKAR IARFEELSSQ
EYQKRNETQE IFIPAGERLG NEVIEFKNVS KSFGDRLLID NLSFKIPAGA IVGIIGPNGA
GKSTLFKMLT GKEQPDSGEV VMGPTVKLAY VDQSRDALDG SKTVFEEISG GADVLTVGKY
ETPSRAYIGR FNFKGGDQQK IVGNLSGGER GRLHLAKTLI SGGNVLLLDE PSNDLDVETL
RALEDALLEF AGSVMVISHD RWFLDRIATH ILAFEGDSQV TFFDGNYQEY EADKRARLGE
EAAKPKRLRY KPISR
|
|---|
| |