Gene Bcenmc03_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0478 
Symbol 
ID6122159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp520848 
End bp521639 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content71% 
IMG OID641637035 
Productextradiol ring-cleavage dioxygenase class III protein subunit B 
Protein accessionYP_001763778 
Protein GI170731831 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.836702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.589534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCT TGCCTTCGCT GTACCTGTCC CACGGCGCCC CGACGCTGCC GATCGACCCG 
GCGCTGCCGT CCGGCGCGTT TACGCACCTC GGCGCCGAGT TGCCGCGCCC GCGCGCGGTG
CTGATGCTGT CCGCGCACTG GGGCACGCAA CGACCGGTCG CGAGCGTCGC CGCGCATCCG
GAGACGATTC ACGATTTCTA CGGTTTCCCG CAGGCGCTGT ACGACATCCG CTATCCGGCG
CCGGGCGCAC CCGACGTCGC CGAGCGCGCG GCCGCGCTGC TGAACGCGGC CGGCATCGCG
ACCGCGACGA CCGAACACGG CCTCGATCAT GGCGCGTGGG TGCCGATGCT GCTGATGTTT
CCGGAAGCCG ACGTGCCGGT CGCGCAACTG TCGATCCAGC CGCGCGCGGA TGCCGCGCAT
CACTTCGCGC TCGGCCGCGC GCTGCGGCCG CTGCGCGACG AAGGCGTGAT GGTGATCGGC
TCGGGCCAGA TCACGCACAA CCTGCGCGCC GCCGATTTCG GCGCGGCGCC CGAGGATGCG
GACCCGCGCG TCGCGGAATT CACCGACTGG TTCGAGGCGA AACTGGCCGC CCGCGACGTC
GACGCGCTGC TCGACTACCG GCGGCAGGCG CCGCACGCGG CGCTGATGCA TCCGACCGAC
GAACATCTGC TGCCGGTCTT CACTGCGCTC GGCGCCGCGG ACGACGACTA CCAACTCGGC
ATCCAGTCGC TCGGCACCTA TCAGCGCGTG CTCGCGATGA CGAACTACGT GTTCGCGAGC
CCCGGCGCCT GA
 
Protein sequence
MNRLPSLYLS HGAPTLPIDP ALPSGAFTHL GAELPRPRAV LMLSAHWGTQ RPVASVAAHP 
ETIHDFYGFP QALYDIRYPA PGAPDVAERA AALLNAAGIA TATTEHGLDH GAWVPMLLMF
PEADVPVAQL SIQPRADAAH HFALGRALRP LRDEGVMVIG SGQITHNLRA ADFGAAPEDA
DPRVAEFTDW FEAKLAARDV DALLDYRRQA PHAALMHPTD EHLLPVFTAL GAADDDYQLG
IQSLGTYQRV LAMTNYVFAS PGA