Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0452 |
Symbol | |
ID | 6122133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 491837 |
End bp | 492958 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641637009 |
Product | ImpA family type VI secretion-associated protein |
Protein accession | YP_001763752 |
Protein GI | 170731805 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCA ATCTCCCCGA GCTGCTGACG CCGATCAGCG ATGCGTCGCC CAGCGGCGAC GACCTGCTGT TTTCGAACGA ATTCGACGCG ATTCAGGACG CGCGGCGCTA CGACGACCCG ACGCTCGACC AGGGCGAATG GGTCACCGAG ATCAAGGAGG CCGACTGGGG CTTCGTCGTC GACCATGCGG GCGAGCTGCT GCGCACCCGC ACCAAGGACC TGCGGCTTGC CGTGTGGCTG ACCGAGGCGC TCGCGCTCGA GGACGGCATC ACGGGCCTCA CCGAAGGCTA TGCGCTGCTC GAAGGCCTGT GCCGCGACTT CTGGGACACC TTCCACCCGC TGCCCGAGGA CGACGACATC GAGCACCGGC TCGGCAACGT CGCGTGGCTG TCCGGCCGCA CGGCCGAGCT GCTGCGCGCG GTGCCGCTGA CGGACGGCGC ATCGAATGCG TTCAGCACGC TCGACTGGGA AGTCGCGCAG CACGTCGCGC AGTCGATCAA GCGCGACCCC GAACACGCGG ACGACATCGC GCGCGGCAAG CCGTCGATCG ACCAGATCGA CGCGTCGCGG CGCGTGACGT CGATCGCGTT CTACACGGCG CTGCTAGCGA ACCTGAAGGC GTTCGAATTC GCGCTCGATG CGTTCGAGGA GCGGCTCGTC GAGCGCGCGG GCGATTGGGC GCCGAGCTTC CGGCAGGCGC GCGACGCGTT CGAGACCGTG TACCGGCTCG CCGAGCGCTT TGCGCGCGAA CAGGGCTATA CGGGCAGCGC GCCGCACGCG CAGGCGGCGC CGCAGGCCCA GCCCGAACGC ATCGAGCCGG TGTTCGGCCA GCCGATCCAG ACCGAGGAGA CTCACGTGCA GCAGCAGACC GCTTCGCGTC CGCCGGTGAC GCAGATGATC GCCGGCATCC AGAACCGTGC GCAGGCCGTC GACCAGTTGC GCGCGGTGGC GCGCTATTTC CGTCAGACCG AGCCGCACAG CCCGGTCGCG TATCTCGCCG ACAAGGCGGC CGAATGGGCA GACATGCCGC TGCACAAGTG GCTCGAGAGC GTCGTGAAGG ACGACGGCTC GCTGTCGCAC ATTCGCGAGC TGCTGGGGGT GAGGCCCGAC GAGCAGGCGT GA
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Protein sequence | MPINLPELLT PISDASPSGD DLLFSNEFDA IQDARRYDDP TLDQGEWVTE IKEADWGFVV DHAGELLRTR TKDLRLAVWL TEALALEDGI TGLTEGYALL EGLCRDFWDT FHPLPEDDDI EHRLGNVAWL SGRTAELLRA VPLTDGASNA FSTLDWEVAQ HVAQSIKRDP EHADDIARGK PSIDQIDASR RVTSIAFYTA LLANLKAFEF ALDAFEERLV ERAGDWAPSF RQARDAFETV YRLAERFARE QGYTGSAPHA QAAPQAQPER IEPVFGQPIQ TEETHVQQQT ASRPPVTQMI AGIQNRAQAV DQLRAVARYF RQTEPHSPVA YLADKAAEWA DMPLHKWLES VVKDDGSLSH IRELLGVRPD EQA
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