| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0434 |
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| Symbol | |
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| ID | 6122115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 466432 |
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| End bp | 469623 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641636991 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001763734 |
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| Protein GI | 170731787 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000011014 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACATGC AGAACACAAT CGCCGCATTG CGCGGCGGGT TGCTTCAGCA GGACCGGTTG
TTGAAGCTCG ATACGCCATT GGGGAGCAAC GTCCTGACCG TGCAGCGGGC AGTTGGCCGT
TCGCGGATCG GGCGCGCATA CGAGTTCACG CTCGACGTGT TGTCGGCCGA TAGCGATCTG
GAGCTTAAAA AGCTGATCGC GCAGCCGGTC ACGTTGTGGA TTCAGCAAGG CGATCGCAGC
TATCGGCCGG TGAATGGCTA CGTGCACACC GCGTGTCGTC TGGGCGCTGA CGGCGGGCTC
ACGACCTATC AGCTCGCGTT CGCCGATTTC ACCCATTTCC TGAAGTTCCG TCGCGACCAG
CGGATCTGGA ACGATACGAC CGTCGACCAG ATCATCAGCG ACGTGCTGAA CCAGCATCCG
CAGGCGAAAG GCCATTTCCG CTTTGCGCTG TCGAAGCCGT TGCCGAACCG CTCGTACACG
CGACAGCACG ACACCGACTG GCATTTCGTG CATCGGCTGA TGGAGGACGA AGGGCTCTAC
TGCGCGTGGC AGCAGGCCGA CGACGGCAAG TCGCACACGC TCGTGGTGAC CGACAACCTG
CAGGCGTTCG CGCCGCTGTC GCCGCAGACC GTGCGCTTCT ATCGTGGCGG GGCGGCGAGC
GAAGCCGATG CGTTCACGCA ATGGTCGGGC ACGCGCACGC TGCAAAGCGT CACGCGATCG
ACGCGCACGT TCGACTACAA GAATCCCGCG CAGCCGTCGA ATCCGAAAGG CACGTCGTTG
CCGACGATGG CCGGTCAGGG CGAATTGCCC GATCAACTCG AAGTCTACGA ATACACCGGT
GCGTACACGT ATCTGGACCA GACGCGCGGC GATCATCTGA CGAAGATCCG GATGGAGCAG
TGGGAGTCGG AGGCGAAGCG TTTCCACGGC GCGGGTGGCG TGCGTGCGAT CGATGCCGGC
CGGCGCTTCA CGCTGGCGGA TCATCCCGAA CACGATCGCG ATCCGGCCGA CCAGCGCGAA
TTCGCGGCGA TCGGCGTCGA ATGGTGGATC GAGAACAACC TGCCCGTTGC GAACGGCAGC
GCGGATTTTC CGTACAGTCT GCGCGACGCG TTGACGCAAG CGCAGGAGGG CTACGGTGCC
GACCCCGCGT TTCGCGTGCC GCACGACGAC GGCTCGGTCG GCTTCTATCT CGTCGAGGTC
GAAGCGCAGC GCGTGAGCGT GCCGTACCGC AGCCCGTTCG AGCATCGCAA GCCGGAGATG
CACCTCGAGA CGGCGATCGT CGTCGGGCCG CAGGGCGAGG AGGTTTATAC CGACGAGCTG
AACCGGATTC GCGTGCAGTT CGTGTGGGAT CGCCTGAACC CGGGTAACGA GAACGCGTCA
TGCTGGGTGC GCGTCGTGCA GTCGGATACG GGCGGCGGCT ACGGCGGCGT GCACGTGCCG
CGCATCGGCG AGGAAGTGTT GATCGACTAC GTCGGCGGCG ACTGCGACCG GCCGCTGGCC
GTCGGGCGCG TGTACAACGG CGCGAACCAG CCGCAGTGGC ATAGCGACGG GATTCTGTCC
GGCTATCGGT CGAAGGAGTA TTCGGGCGGC GGCTACAACC AGCTCGTGAT GGACGACGCG
ACCGGGCAGA ACCGCGTGCA ACTGATGAGC AGCAGCGCGA ACAGCCTGCT GCATCTCGGC
TACATCATCG ACCAGAACGG CAATGCGCGC GGATCGTATC TGGGCAGCGG TTTCGATCTG
CGCTCGGATG CATATGGCGC GGTGCGGGCG AGCCAGGGCC TGTACGTGAC GACCCACCCG
AAGGCGGCGA ACAGCCAGCC GCTCGACGTG AAGGAGGCGC AGCAGCAGCT CGTGGCGGGC
GAGAGCCTGG TCGAGGCGAT GTCGGGCGTG AGCGAGCAGC ATCAGGCGGA GAGCCTGAAG
GACGCGCAAG ACACGATGCG CGCGTTCACG GACGCGACGC AGGACAGCCA GTCGGGCAGC
GCGGCGGGCG GGCGCACGGC GGGCGGCGGT ACCGGTAACG CGAACGCGTT CAAGGAACCG
GTGATGCTGT TCGGCAGCCC GTCGGGAATC GGGATGTCGA CGCAGCAGTC GGTGCATATG
GTCGCGAACG ATCACGTGAA CGTGGCGAGC GGACAGAGCG TGCACGTGGC CGCGGGCAAG
TCGCTGATCG GCAGCATCGG GCAGAAGCTG AGCCTGTTCG TGCAGAACGC GGGGATGAAG
CTGTTCGCGG GCAAGGGCAA GGTCGAGATC CAGGCGCAGT CGGACAACGT CGAGGTGACC
GCGCAGAAGG CGGTGAGGGT GGTGTCGGCG ACGGACCGGA TTGAGATCGC GGCTGATCAG
GGGATTCTGC TGACGAGCGG CGGCGGATAT ATCCGCATCA AGGACGGCAA CATCGAGATT
CATACGCCGG GCGCGGTCGA TGTGAAAGGG GCGTCGCATA CGTTCGCGGG GCCGGCGAGC
ATGGGGTATC CGCTGCCGAG CCCGCGGCCG GATCAACCGG GGCAGCTCGA GCTGTTTCAC
AAGTACGTGA ACGGCGAGGC GGTGAAGGGC GGGCTGTTCA CGGTGAAGGA CGTGAACGGC
GCCGTGCTGA AGAAAGGCGC ACTCGACAAC AGCGGCTATA CGGTCGTGAG CGGCTTGCCG
CCCGGGGCGG TGCGCGTCGA ATTCGGGAAA GACCCACGCG AGTCGGATCA GCCGGCGAAC
TATTTCAAGC AGGTGAAGTG GCCGGCGGAG CCCGTGCAAC CGTCGCCCGA GGCCGCGCAG
GCCGCGGCGA GCGGACAGCT CGCGAGTCAG CTGCAAGGGA TGGCGCCGGC CGCGACGACC
GCGGCGATGG GGCTGGTGAG CGGCGGCGGC GCGGGTGCGG CCCTCGGCGG GCTCGCGAGC
GCCGCATTGC CGGCTGCTGC GACCGCGTTG GGTGGCGCCG GCGTGGCGTC CGCGTTGCAG
ACCGCGTCGA GCCTGAGCGG TGCGGCGAAG CAGGTGGCCG GGATGGTTCA GGCCGCCCGT
CAGGGCGGGC TTGCCGCGCT GGCCGCGCCG GCTGCGAATG CGGCGTCCGG GGCGTTGCAG
GGCGCGTTGC CCGGTGCATT GCCGGGCGTG GCCGGTATCG CGGGCAAGGG CGCCACGACC
GTGGCCTCGG CCGCGGGCGC GACGGGCATG AAGCTGCCGA CAAGCGGGTT TGGCGGACCG
TTGAAATCCT GA
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| Protein sequence | MNMQNTIAAL RGGLLQQDRL LKLDTPLGSN VLTVQRAVGR SRIGRAYEFT LDVLSADSDL
ELKKLIAQPV TLWIQQGDRS YRPVNGYVHT ACRLGADGGL TTYQLAFADF THFLKFRRDQ
RIWNDTTVDQ IISDVLNQHP QAKGHFRFAL SKPLPNRSYT RQHDTDWHFV HRLMEDEGLY
CAWQQADDGK SHTLVVTDNL QAFAPLSPQT VRFYRGGAAS EADAFTQWSG TRTLQSVTRS
TRTFDYKNPA QPSNPKGTSL PTMAGQGELP DQLEVYEYTG AYTYLDQTRG DHLTKIRMEQ
WESEAKRFHG AGGVRAIDAG RRFTLADHPE HDRDPADQRE FAAIGVEWWI ENNLPVANGS
ADFPYSLRDA LTQAQEGYGA DPAFRVPHDD GSVGFYLVEV EAQRVSVPYR SPFEHRKPEM
HLETAIVVGP QGEEVYTDEL NRIRVQFVWD RLNPGNENAS CWVRVVQSDT GGGYGGVHVP
RIGEEVLIDY VGGDCDRPLA VGRVYNGANQ PQWHSDGILS GYRSKEYSGG GYNQLVMDDA
TGQNRVQLMS SSANSLLHLG YIIDQNGNAR GSYLGSGFDL RSDAYGAVRA SQGLYVTTHP
KAANSQPLDV KEAQQQLVAG ESLVEAMSGV SEQHQAESLK DAQDTMRAFT DATQDSQSGS
AAGGRTAGGG TGNANAFKEP VMLFGSPSGI GMSTQQSVHM VANDHVNVAS GQSVHVAAGK
SLIGSIGQKL SLFVQNAGMK LFAGKGKVEI QAQSDNVEVT AQKAVRVVSA TDRIEIAADQ
GILLTSGGGY IRIKDGNIEI HTPGAVDVKG ASHTFAGPAS MGYPLPSPRP DQPGQLELFH
KYVNGEAVKG GLFTVKDVNG AVLKKGALDN SGYTVVSGLP PGAVRVEFGK DPRESDQPAN
YFKQVKWPAE PVQPSPEAAQ AAASGQLASQ LQGMAPAATT AAMGLVSGGG AGAALGGLAS
AALPAAATAL GGAGVASALQ TASSLSGAAK QVAGMVQAAR QGGLAALAAP AANAASGALQ
GALPGALPGV AGIAGKGATT VASAAGATGM KLPTSGFGGP LKS
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