Gene Bcenmc03_0282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0282 
Symbol 
ID6121965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp310802 
End bp311968 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content68% 
IMG OID641636831 
Producthypothetical protein 
Protein accessionYP_001763584 
Protein GI170731637 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.548142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000619818 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGATCC CGCTCACCTA CATCGCACGC AACCTGTGGA CCCGGCGCCT GACCACCGCG 
CTCACCGCGG GCGGGATGGC GCTCGTGATC TTCGTGTTCG CGACGGTGCA GATGCTCGAT
GCCGGCCTCA CGAAAACGCT CGTGTCGACC GGCGAACCCG ACAACGCGGT GGTGATCCGC
AAGGGTGCCG AGACCGAGAT CCAGAGTTCG ATCGACCACC AGCAGGCCAA CGCGCTCGAG
ATGCACCCGG CCGTCGCGCT CGGCCCCGAC GGCCGGCCGC TCGTGTCGAA GGAAGCCGTC
GTGCTGATCT CGCTCGTGAA GACGTCGACC GGCAAGCCGT CGAACGTCGT GATCCGCGGC
GTGTCGCCGG CCGGCCTCGC GCTGCGGCCG CACGTGAAGC TCGTGGCCGG CCGCCCGTTC
GCGCCCGGCT CGTCGGAGAT CGTCGTCGGC AGCGCGATCG CGAAAGGCTT CAGCGGCACC
CAGCTCGGCG ACCGCCTGCA TTTCGCGCAG CGCGACTGGA CCATCGTCGG TATCTTCGAT
GCGGGCGGCA GCGGCTTCGA TTCGGAGATC TGGGGCGACG TCGACCAGCT GATGCAGTCG
TTCCGGCGCA CCAGCTATTC GTCGATGGTG CTGCGCATCC CGAGCGCCGA CGGCTTCGCA
CGCTTCAAGG CCGACATCGA CGTCGACCCG CGACTGACCG ACGAGGCGAA GCGCGAGCAG
ACCTTCTACG GCGACCAGTC GAAGGCGCTG TCGACCTTCA TCAACATCCT CGGCATCACG
CTGTCGACGA TCTTCTCGAT CGCCGCGATG ATCGGCGCGA TGATCACGAT GTATGCGTCG
GTCGCGAACC GCGTGGCCGA GATCGGCACG CTGCGCGCGC TCGGCTTCAA GCGCACCAAC
GTGCTCGCCG CGTTCCTGCT GGAGGCGCTG CTGCTCGGCT TCGTCGGCGG CGTCGCGGGG
CTCGCGTGCG CGTCGCTGAT GCAGTTCGCG TCGTTCTCGA CGACCAACTT CCAGACTTTC
TCGGACCTGT CGTTCCGCTT CGTGCTGACG CCCGCGATCG TCGTGAAGAC GCTGCTGTTC
TCGCTCGTGA TGGGGCTCGT CGGCGGGTTC CTGCCGGCGA TGCGCGCCGC GCGACTGAAG
ATCGTCGACG CGCTGCGCGC GCAGTGA
 
Protein sequence
MAIPLTYIAR NLWTRRLTTA LTAGGMALVI FVFATVQMLD AGLTKTLVST GEPDNAVVIR 
KGAETEIQSS IDHQQANALE MHPAVALGPD GRPLVSKEAV VLISLVKTST GKPSNVVIRG
VSPAGLALRP HVKLVAGRPF APGSSEIVVG SAIAKGFSGT QLGDRLHFAQ RDWTIVGIFD
AGGSGFDSEI WGDVDQLMQS FRRTSYSSMV LRIPSADGFA RFKADIDVDP RLTDEAKREQ
TFYGDQSKAL STFINILGIT LSTIFSIAAM IGAMITMYAS VANRVAEIGT LRALGFKRTN
VLAAFLLEAL LLGFVGGVAG LACASLMQFA SFSTTNFQTF SDLSFRFVLT PAIVVKTLLF
SLVMGLVGGF LPAMRAARLK IVDALRAQ