| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0272 |
|---|
| Symbol | |
|---|
| ID | 6121955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 301518 |
|---|
| End bp | 302102 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641636820 |
|---|
| Product | phosphoheptose isomerase |
|---|
| Protein accession | YP_001763574 |
|---|
| Protein GI | 170731627 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0279] Phosphoheptose isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0418339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTCG AACGTATTCA GCAGCAATTC CGCGACAGCG CCGCGCTTCA CGCCGAAGCG
GCCGACGCGC TGTCGCTGCC GATCGCAGCC GCGGTCGATG CGATGTTCGC CGCGCTGGCG
AACGGCAACA AGATCGTCGC GTGCGGTGAC GGCCCGTCGG CCGCCGCCGC GCAGTACCTC
GCCGCTTCGC TGGTCGGCGG GTTCGAGCGC GAACGTCCGG GCCTGCCCGC GATCGCGCTG
GCCACCGACG CGTCGCAGGC CGGCCTCGCG GGCGCGGCGG CGGCCGAGCA GTTGTTCGCG
CAGCAGGTGC GCGTGCTGGG CCAGACGGGC GACATCCTGC TGGTGCTCGA CGCGGGCGGC
GCATCGCCGC GCGTGCTCGC GGCGATCGAC GAGGCGCACG AGCGCGAGAT GACCATCGTC
GCATTGACGG GCGGCAACGA CCACACGGTC GCGGCCGCGC TGTCCGACAC CGATATCCCA
ATCAGCGTGC CCGCCGTTCG CGCGGCGCGC ATCCACGAAG TCCATCTGCT GACCATCCAC
AGCCTGTGCG ACGGCATCGA CGCGATGCTG CTGGGTGAGG ATTGA
|
|---|
| Protein sequence | MSVERIQQQF RDSAALHAEA ADALSLPIAA AVDAMFAALA NGNKIVACGD GPSAAAAQYL
AASLVGGFER ERPGLPAIAL ATDASQAGLA GAAAAEQLFA QQVRVLGQTG DILLVLDAGG
ASPRVLAAID EAHEREMTIV ALTGGNDHTV AAALSDTDIP ISVPAVRAAR IHEVHLLTIH
SLCDGIDAML LGED
|
|---|
| |