Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0152 |
Symbol | |
ID | 6121835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 181482 |
End bp | 183185 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641636699 |
Product | thiamine pyrophosphate protein |
Protein accession | YP_001763454 |
Protein GI | 170731507 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATT CCAAGGATCT CGAGCCGCGC GCCACCACCG GTGCGCGACT GCTCGTCGAT GCGTTGCTCG CCAATCACGT CGAACGCGTG TTCTGCGTGC CGGGCGAGAG CTTCCTCGCC GTGCTCGATG CGCTGGCGGA CGACACCGCC CGCATCCAGA CGGTCGTCTG CCGCCACGAG GCGGCCGCCG CGAACATGGC CGAAGCGGTC GGCAAGCTGA CCGGCCGCCC CGGCATCGCA TTCGTCACGC GCGGGCCCGG CGCGACCCAT GCGTCGATCG GCGTACACAC CGCGTTCCAG GATTCGACGC CGATGATCCT GTTCGTCGGC CAGTGCGCAC GCGAACACCT CGACCGCGAA GCCTTCCAGG AAATCGACTA CCGCCGGATG TTCGGCCAGA TGGCCAAATG GGTCGCGCAG ATCGACGACC CGCGCCGCAT CCCCGAATAC CTGAGCCATG CGTTCCACGT CGCGACGTCT GGCCGACCCG GCCCGGTCGT GCTCGCGCTG CCGGAGGATG TGCTGTCCGA CGCGTGCGCG CCGCAGCCCG GCGTGCCGGC CGCGAAACGC ATCGCGGCCG CGCCGTCGCC CGCGCAGATC GACGAGCTGC GCGAGCGGCT CGCGCGCGCG GAACGGCCGT TCGCGATCGT CGGCGGCAGC GGCTGGACGC CGGACGCCTG CGCGAACCTG CGCACCTTCG TCGAACGCTG GCAATTGCCG GTCGCGTGCG CGTTCCGCTT CCAGGACACG ATCGACAACG CGCACCCGAA CTACGCGGGC GACGTCGGGC TCGGGATCAA CCCCGCGCTC GCGAAACGCA TCCGCGACGC CGACCTGCTG CTCGTGATCG GGCCGCGCCT CGGCGAAGCG ACGACCGGCG GCTACACGCT GCTCGACATC CCGAAAACGC GCCAGACGCT GATCCACGTG CATCAGGGCG CGGACGAACT CGGCCACGTG TACGCCGCCG ACCTGCCGAT CGTGTCGGGC ATGCCCGAGA TCGCCGCGCC GCTGGCCGCG CTCGAACCGC CCGAGCGGCC TGCGTGGGCC GGCGCGGCCA CCGACGCGCA CCGCGCGTAC CGCGAATGGC ATGCGCCGCT GCCGATGCCC GGCGACGTGC AGCTCGGCGA CGTGATGGTG CAGTTGCGCG AGCGCCTGCC GCACGACGCG ATCCTGACCA ACGGCGCGGG TAACTACGCG ATCTGGCTGC ATCGCCACTT CGCGTACCGG CACTTCCGTT CGCAGCTTGC GCCGACGAGC GGCGCGATGG GCTACGGGCT GCCGGCCGCG CTCGCGGCGA AGTCGCTGTA TCCGCAGCGC GCGGTTGTCG CGCTCGCGGG CGACGGCTGC TTCATGATGG CCGGCAACGA GCTTGCGACC GCGATGCAGT ACGGGCTGAA CATCGTCGCG ATCGTCATCA ACAACGGCCA TTTCGGCACG ATCCGCATGC ATCAGGAGCG CAACTACCCG GGCCGCGTGC ACGGCACAGG GCTCACGAAT CCCGATTTCG CCGCGTATGC GCGTGCGTTC GGCGCGCATG GCGAGACGGT CGAGCGCACT GCCGATTTCG CGCCGGCGCT CGAACGCGCG CTGACCTGCG GATTGCCCGC GGTGATCGAG ATCCGCATCC CGCAGGACGC CAGCACGCCG GCCGCGACGC TCGAACAGAT TCGCGAGCAG GGCCGCCGCG CGCGCGGCGC ATGA
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Protein sequence | MSHSKDLEPR ATTGARLLVD ALLANHVERV FCVPGESFLA VLDALADDTA RIQTVVCRHE AAAANMAEAV GKLTGRPGIA FVTRGPGATH ASIGVHTAFQ DSTPMILFVG QCAREHLDRE AFQEIDYRRM FGQMAKWVAQ IDDPRRIPEY LSHAFHVATS GRPGPVVLAL PEDVLSDACA PQPGVPAAKR IAAAPSPAQI DELRERLARA ERPFAIVGGS GWTPDACANL RTFVERWQLP VACAFRFQDT IDNAHPNYAG DVGLGINPAL AKRIRDADLL LVIGPRLGEA TTGGYTLLDI PKTRQTLIHV HQGADELGHV YAADLPIVSG MPEIAAPLAA LEPPERPAWA GAATDAHRAY REWHAPLPMP GDVQLGDVMV QLRERLPHDA ILTNGAGNYA IWLHRHFAYR HFRSQLAPTS GAMGYGLPAA LAAKSLYPQR AVVALAGDGC FMMAGNELAT AMQYGLNIVA IVINNGHFGT IRMHQERNYP GRVHGTGLTN PDFAAYARAF GAHGETVERT ADFAPALERA LTCGLPAVIE IRIPQDASTP AATLEQIREQ GRRARGA
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