Gene Bcenmc03_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0107 
Symbol 
ID6121790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp123443 
End bp124498 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content67% 
IMG OID641636654 
Productinner-membrane translocator 
Protein accessionYP_001763409 
Protein GI170731462 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.790851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCT CGATTGCGGC GATCCTCGCG CAAGACGGCA TCACGACCGG CGCCATTTAT 
GCATTGTTGT CGCTGGCGCT CGTGCTGGTG TTTTCCGTCA CGCGGGTGAT CTTCATTCCC
CAGGGCGAGT TCGTCGCCTA CGGTGCGCTG ACGCTCGCCG CGTTGCAGGC GCAGAAATTC
CCCGCCACCT GCTGGCTGCT GTTCGTGATG GGCATCGCGT GCTTCCTGCT CGAAGTCGGC
GGCCTGATCC GGCATCGCGA ACGACGCCAT CAGCTCGGCC GCACGCTCGC GACGCTCGGC
AGCCGCTACA TCCTGCTGCC GCTCGCGGTG TTCGCGATCA CGCGCAGCTT CGCCGCGCAG
CCGATGCCGA TGCTCGCGCA GATTGCGCTG ACGCTCGCGA TCGTCGTGCC GATGGGGCCG
TTCGTCTACC GGCTCGTGTA CCAGCCGATC GCCGAAGGCA CGACGCTGCT GCTGCTGATC
GTGTCGGTGG CCGTCCATTT CGCGATGGTC GGCCTCGGCC TCGTGATGTT CGGCGCGGAA
GGCTCGCGCA CCAACGCGTT CTCGGACGCG TCGCTCGCGA TCGGCAGCAT GACGGTGTCG
GTGCAGAGCG TCCTGGTCGT CGTCACGGCG CTCGTGCTGA TCGGTGCGCT CTACGTGTAC
TTCGGCCGCA CGATCGCCGG CAAAGCGCTG CGCGCGACCT CGGTGAACCG GCTCGGCGCG
CGGCTCGTCG GCATCGGCAC GACCGAAGCC GGGCGGCTCG CGTTCACGTT CGCGGCGGGG
CTCGGCGTGC TGTCGGGGAT CCTCGTCGGC CCGCTGACGA CGATCTACTA CGACTCGGGC
TTCCTGATCG GCCTGAAGGG CTTCGTCGGC GCGATCATCG GCGGGCTCGT CAGCTATCCG
CTCGCGGCCG CCGGCTCGCT GCTCGTCGGC GTGCTCGAAT CCTATTCGTC GTTCTGGGCG
AGCGCCTACA AGGAGGTGAT CGTGTTCACG CTGATCATTC CGGTGCTGCT GTGGCGGAGC
TTCGTGACGC CGCATGCGGA AGAGGAAGAG GAGTGA
 
Protein sequence
MDLSIAAILA QDGITTGAIY ALLSLALVLV FSVTRVIFIP QGEFVAYGAL TLAALQAQKF 
PATCWLLFVM GIACFLLEVG GLIRHRERRH QLGRTLATLG SRYILLPLAV FAITRSFAAQ
PMPMLAQIAL TLAIVVPMGP FVYRLVYQPI AEGTTLLLLI VSVAVHFAMV GLGLVMFGAE
GSRTNAFSDA SLAIGSMTVS VQSVLVVVTA LVLIGALYVY FGRTIAGKAL RATSVNRLGA
RLVGIGTTEA GRLAFTFAAG LGVLSGILVG PLTTIYYDSG FLIGLKGFVG AIIGGLVSYP
LAAAGSLLVG VLESYSSFWA SAYKEVIVFT LIIPVLLWRS FVTPHAEEEE E