Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0106 |
Symbol | |
ID | 6121789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 122085 |
End bp | 123242 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641636653 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001763408 |
Protein GI | 170731461 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.113472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGA ATCGATGGAT GGAGGCCCTG CTTGCCGCGG GTCTCGTGTG TGCGGCGGCC ACGGCGTCGG CGCAGGTAAA GATCGGCGTG ACGCTGTCGG CCACCGGCCC GGCCGCGTCG CTCGGGATTC CGGAAAAGAA CACGATCGCG CTGCTGCCGA AGGAAATCGC GGGCAAGAGC GTGCAGTACA TCGTGCTGGA CGACGCGTCC GACACGAGCC GCGCGGTGCA GAACGTGCGC AAGCTGATCG ACGAGGACCA CGTCGACGCG ATCATCGGCT CGTCCGTCAC GCCGAATTCG CTCGCGATGC TCGATCCCGT GTCGCAGGGC AAGACGCCGG CGATCTCGCT CGCGGCGAGC GCGCAGATCA TCGCACCGAT GGACGCGAAG CGCGCATGGA TGTTCAAGGT GCCGCAGAAC GACCAACTGA TGGCCGACGC GATCGCCGGC TATATGGCCA AGCACGGCGT GAAGACGGTC GGCTTCATCG GCTTCGCCGA TGCGTACGGC GACAGCTGGT ACAAGACGTT CGACGCGGCG GCCGCGAAGA ACGGGCTGAA GCTCGTGTCG AACGAGCGCT ACAACCGGAC CGACGCGTCG GTGATGGGGC AGGTGCTGAA GCTGTTGGGC GCGAACCCGG ATGCGGTGCT GATCGCCGGC TCCGGCACGC CGGCGGCGCT GCCGGCCAAG ACGCTGAAGG AGCGCGGCTA CAAGGGCAAG GTGTACCAGA CGCACGGCGT CGCGAACAAC GATTTCCTGC GCGTGTGCGG CAAGGATTGC GAAGGCGAGA TCCTGCCGGC CGGCCCCGTG CTCGTGACCG ACCAGCTGCC CGACTCGAAT CCGGTGAAGA AGCCGGCGCT CGGCTACAAG GCCGCGTACG AGAAGGCCTA CGGCGCGGGT TCGTTGTCGA CGTTCGGCGG CCATGCGTGG GATGCGGGCC TGCTGCTGCA GCGGGCGATC CCGGAAGCGC TGAAGAAGGG CCAGCCGGGC ACCGAGGCGT TCCGCGAAGC GCTGCGCGCG TCGCTCGAAA GCGTGAAGGA TCTGCCGGTC TCGCATGGCG TAATCAACAT GACGGCGACC GATCACAATG GCTTCGACAC GCGTGCGCGC GTGATGGTGC AGATCGTCGA CGGCAAGTGG AAGCTGCAGG CCGAGTAA
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Protein sequence | MKMNRWMEAL LAAGLVCAAA TASAQVKIGV TLSATGPAAS LGIPEKNTIA LLPKEIAGKS VQYIVLDDAS DTSRAVQNVR KLIDEDHVDA IIGSSVTPNS LAMLDPVSQG KTPAISLAAS AQIIAPMDAK RAWMFKVPQN DQLMADAIAG YMAKHGVKTV GFIGFADAYG DSWYKTFDAA AAKNGLKLVS NERYNRTDAS VMGQVLKLLG ANPDAVLIAG SGTPAALPAK TLKERGYKGK VYQTHGVANN DFLRVCGKDC EGEILPAGPV LVTDQLPDSN PVKKPALGYK AAYEKAYGAG SLSTFGGHAW DAGLLLQRAI PEALKKGQPG TEAFREALRA SLESVKDLPV SHGVINMTAT DHNGFDTRAR VMVQIVDGKW KLQAE
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