Gene Bcenmc03_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0082 
Symbol 
ID6121765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp95622 
End bp96107 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID641636629 
Productlytic transglycosylase catalytic 
Protein accessionYP_001763384 
Protein GI170731437 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC GGTTCGCTTC GATCGCGTTG ATCGCCGCCG GCGCGTGGTT CGCCAGCGGC 
AACGCACGCG CGGACTGTTT CGACGAAGCG GCCAAATATC AGCAGGTCAA TCCGCTGATC
CTGCGCGCGA TCGCGTGGCA GGAATCGCGC AACCGGCCCG GTGCGCTGAA CAAGAACACG
AACGGCTCGG TCGACTACGG CCTGATGCAG ATCAATTCGA TCCACTTGCC GACGCTGTCG
CGCTACGGAA TCGGCCGCGA CACGCTGATG GAGCCGTGCA AGAACGTGTA CATCGCCGCG
TGGCATCTCA AACAGAAGAT GAACCGCTAC GGCAACACGT GGCAGGCAGT CGGCGCCTAT
CATTCGGAAA CGCCGTCGCT GCGCGACAAG TACGCGCGGC AGATCGCCGC CATCCTGACG
CAATGGAAGC TGCTGCCGCC CGCGCAGACC ACCCAGGCCG CTCAAGCGCC TCAAGCCGCT
CAGTGA
 
Protein sequence
MNRRFASIAL IAAGAWFASG NARADCFDEA AKYQQVNPLI LRAIAWQESR NRPGALNKNT 
NGSVDYGLMQ INSIHLPTLS RYGIGRDTLM EPCKNVYIAA WHLKQKMNRY GNTWQAVGAY
HSETPSLRDK YARQIAAILT QWKLLPPAQT TQAAQAPQAA Q