Gene Bcenmc03_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0043 
Symbol 
ID6121726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp56994 
End bp57959 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content60% 
IMG OID641636590 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_001763345 
Protein GI170731398 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.706965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTC CTTCTGCCGT AACGGTCGGC ATTGACGTCG CAAAAGCTCA CGTCGATGTT 
TCCGTACTGG GTGCCAATCT GGACATCCGT CGATTCAACA ACGATGCCGA GGGCCACTCG
GCCCTGGCTG TTGCCCTTCA GCCGCTGAAC GTGCAGTTGG TCGTGATGGA GGCGACCGGT
GGCTACGAGA CCGAGCTGGC GTGCGCCTTG CAAGGTGCGG GTTTGCCGGT CGCTGTCGTC
AACCCTCGGC AAGCACGCGA TTTTGCCCGC TCGATGGGAC GTCTGGCCAA AACCGACGCC
ATCGACGCAC GTATGCTTGC CGAACTGGCT TCCGTGCTAC TGCGTCGGGA CGATCTGTCC
CGCTTGCTAC GTCCCGTTCC CGACGAGCGG CAGCAGTGGC TGGCTGCACT GGTGACCCGA
CGGCGCCAAC TACTCACCAT GCTCCTTTCG GAGCGACAGC GGCTCCAGAT CACGCCGGTT
GGTCTGCATT CAAGTCTGCT GGCTATCATT GCCGCCATCC AGGCACAACT CGATGACATT
GACGCTCAGA TGGTCGCTCA TGTACGCCAG CACTTCGGTG AACTCGACCG CCTGTTGCAG
TCCACACATG GAATTGGCCC GGTATCCAGC GCCTGCCTGA TCGCAGAACT GCCCGAATTG
GGCCGGCTCA ATCGCCGTCA GATTGCAGCC CTCGTTGGCG TCGCTCCCAT TGCTTGCGAT
TCCGGCTTAC GTAATGGGCG ACGACGGGTT CAAGGTGGCC GCTTCGCGAT CCGTCGCGTG
CTGTACATGG CTACATTGAC TGCCACACGC TACAACCCCG CCATCAGAGC CTTCTATCAA
CGCCTGAAGG CCGCCGGCAA ACTGTCCAAG GTCGCGCTTG TTGCCTGCAT GCGCAAGCTC
CTAACCATGC TCAATGCCAT GGTCAAAACC AACACGCCTT GGGACGATTC ACTTCATCGG
GCTTGA
 
Protein sequence
MSAPSAVTVG IDVAKAHVDV SVLGANLDIR RFNNDAEGHS ALAVALQPLN VQLVVMEATG 
GYETELACAL QGAGLPVAVV NPRQARDFAR SMGRLAKTDA IDARMLAELA SVLLRRDDLS
RLLRPVPDER QQWLAALVTR RRQLLTMLLS ERQRLQITPV GLHSSLLAII AAIQAQLDDI
DAQMVAHVRQ HFGELDRLLQ STHGIGPVSS ACLIAELPEL GRLNRRQIAA LVGVAPIACD
SGLRNGRRRV QGGRFAIRRV LYMATLTATR YNPAIRAFYQ RLKAAGKLSK VALVACMRKL
LTMLNAMVKT NTPWDDSLHR A