Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6529 |
Symbol | |
ID | 4096497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 1174201 |
End bp | 1176378 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638019814 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_626361 |
Protein GI | 107029266 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.180795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGATGG AGACAGGGAC GGGGCGGCGC GCGCGGGCGA TCGCGGCAGG CGGAGCGTGG TGCGTGGCCG CCGCGGGCGC GGCGCACGCG CAGGCACCGG CGCCGGGCGC GGCGGTGGCG GTGCTGCCGG CCATCGACGT GCGAGGGCCG GTCGATGCTG CTTCGTCCGT CGGACTGGTC GGGCGGCGCA CCGCCACCGG CACCAAGACC GACACGCCGG TCGACGAGAT TCCGCAAACG CTCAACCTCG TGACCGCGCA ACAGATCGAC ATGACCGGCG CGGCCGACCT GAACCAGGCG TTGCGCTACG TGCCGGGTTT CGCGACGTTC GGCGCCGACA GCCGCACCGA CTGGTATGCG GCGCTGCGCG GCTTCACGCC GACGCTGTAC GTCGACGGCC TGCCGGCGCC GAACACGGCC GTGATCGCGA ACTGGCGCGT CGATCCGTAC ACGATCGACT CGATCGCGGT GCTGCGAGGG CCGACGTCGG TGCTGTACGG CGCGGGCGAG CCGGGTGCGA TCGTCGATGC ACATACGAAA CTCGCCGACG GCGAGCGCGT GCGCGAAGCC GGCGTGCAGA TCGGCAACGA TGCGCGCAAG CAAGCCATGC TCGACGTCGG CGACAGGCTT GATCCGGATG GAAAGTATGC CTACCGATTC GTCGGCATCG CGCGCGACGG CAACGCGGTG ACCGGCCCGA ACGGCGACCG CCGCGTCGCG CTCGCGCCGT CGTTCCGGTG GCGGCCGAAC GCCGACACGT CGCTGACGCT TTCCGCGACG TTCCTGCAGG ACAGCGGCGA CATCTCGTCG AACTTCCTGC CCGCATCGGG CACGGTGCTG CCGAACCCGA ACGGCCGCCT GTCGCAGGAC CTCTACATGG GCGACCCGTC GTTCAACGAC TATCGCAAGA AGCAATGGTC GCTCGGTTAC GCGCTGGAAC ACCGCGTGAA TGCGATCTGG TCGTTGCACC AGGACGTGCG CTGGTCGCAC CTGTCGCTCG ACGATGCGAC GGTGTTCGGC AACGGCCTCG CGCCCCGCAG CACGACGAAC ATGATGCGTT TCGCGGGGCT GTTCCAGCTC AACTACAGCC GGTTCGACAT CGACAACCAC GCGCAGGCGC GCTTCGGCAC GGGGTCGCTC GAACACACGC TGCTGTTCGG CGTGCAGTTC GACCGGCAGA CGACGACCAA CAGCGTATGG CTCGCGCTCG CGCCGTCGCT CGACCTGTAC CACCCCGTCT ATCGGCCCGT GACGGCCGCG ATCTTCTCCG GCCCGACGTC GCTCGGCCAC GTCGATCAGT ACACCGCGAT GAACGGTGTC GGCGTGTACG CGCAGGACCA GATCCGCTGG CAGCGCTGGA CGCTGACGCT CGGCGGCCGC GAGGATGTCG TGAATGCGCG CTTCGACGAC CGCACCGCCG GCACGCATGC GCAGCAGGAC GTCAGTGCAT TCTCCGGGCG GGTCGGGCTC ACCTATCGCG GCGACGCCGG ATTGTCGCCT TACGTCAGCT ATTCGACGTC GTTCGATCCC GTCATCGGCG TGCGGATGTT CGGCGGCGGC TTGCCGAAAC CGACCCGCGG CACGCAGACG GAGGCCGGGC TGCGCTGGCA GCCGGCCGGC CGGAACCTGA TGCTGAACGC GGCCGTGTAT CAGATCGACC AGACCAACGT CGTGACGCCG ACGCCGGTCA ATCTCGACCC GACCGCCACG ACGTCGGTAC AGACCGGCAA GGTGCGCTCG CGCGGCATCG AGCTGAGCGC GGTCGGCAAG GTGACGCACG GGCTGTCGAT CGTCGCGTCG TATGCGTATC AGGACGTCAA GAACGTGCAG GCGAACGACG TATCGCTGAG TCACTGGCCA GTGTCCGTGC CGCTGCCGCG GCAGATGGCG TCGATGTGGG CCGACTGGAC CTGGCATACG GGCGCGCTGG CGGGCCTCGG CGTCGGCGGT GGCGTGCGCT ACCAGAGCGC GTCGGCGGGC GCGCCCGACA ATTCGCTGAC GGTGCCGAGC GCGACGCTTT ACGACCTCGC GATCCATTAC GACCTGCCGC GCTGGCGTTT CGCGGTGAAC GTCGCGAACC TGTTCGACCG GCGCTATGTG AGCGGCTGCC AGTCGTACGC GGTGTGCGTG TTCGGCAACG AGCGGACCGT GCTGGCCAGC GCGAAATACA ACTGGTAA
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Protein sequence | MWMETGTGRR ARAIAAGGAW CVAAAGAAHA QAPAPGAAVA VLPAIDVRGP VDAASSVGLV GRRTATGTKT DTPVDEIPQT LNLVTAQQID MTGAADLNQA LRYVPGFATF GADSRTDWYA ALRGFTPTLY VDGLPAPNTA VIANWRVDPY TIDSIAVLRG PTSVLYGAGE PGAIVDAHTK LADGERVREA GVQIGNDARK QAMLDVGDRL DPDGKYAYRF VGIARDGNAV TGPNGDRRVA LAPSFRWRPN ADTSLTLSAT FLQDSGDISS NFLPASGTVL PNPNGRLSQD LYMGDPSFND YRKKQWSLGY ALEHRVNAIW SLHQDVRWSH LSLDDATVFG NGLAPRSTTN MMRFAGLFQL NYSRFDIDNH AQARFGTGSL EHTLLFGVQF DRQTTTNSVW LALAPSLDLY HPVYRPVTAA IFSGPTSLGH VDQYTAMNGV GVYAQDQIRW QRWTLTLGGR EDVVNARFDD RTAGTHAQQD VSAFSGRVGL TYRGDAGLSP YVSYSTSFDP VIGVRMFGGG LPKPTRGTQT EAGLRWQPAG RNLMLNAAVY QIDQTNVVTP TPVNLDPTAT TSVQTGKVRS RGIELSAVGK VTHGLSIVAS YAYQDVKNVQ ANDVSLSHWP VSVPLPRQMA SMWADWTWHT GALAGLGVGG GVRYQSASAG APDNSLTVPS ATLYDLAIHY DLPRWRFAVN VANLFDRRYV SGCQSYAVCV FGNERTVLAS AKYNW
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